RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 LRP11Q86VZ4 500 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 DDIASQ8IXT1 998 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 CCDC36Q8IYA8 594 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 SIGLECL1Q8N7X8 197 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 RAB39BQ96DA2 213 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 PPP3R2Q96LZ3 170 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 ZNF385DQ9H6B1 395 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 OPN4Q9UHM6 478 aa16.27■□□□□ 0.2
SORT1-203ENST00000471996 PRPS1L1P21108 318 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 GATA3P23771 443 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 CAPZA2P47755 286 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 DOK3Q7L591 496 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 RIMKLAQ8IXN7 391 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 CMIPQ8IY22 773 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 TWIST2Q8WVJ9 160 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 RAB8BQ92930 207 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 TAPBPLQ9BX59 468 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 C7orf69Q9H7B7 122 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 ZMAT3Q9HA38 289 aaKnown RBP16.26■□□□□ 0.19
SORT1-203ENST00000471996 MYEF2Q9P2K5 600 aaKnown RBP16.26■□□□□ 0.19
SORT1-203ENST00000471996 RASD1Q9Y272 281 aa16.26■□□□□ 0.19
SORT1-203ENST00000471996 PLIN3O60664 434 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 PEX11AO75192 247 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 ZNF432O94892 652 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 CHRM4P08173 479 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 ABHD2P08910 425 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 NUDT17P0C025 328 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 NAT2P11245 290 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 ZNF35P13682 527 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 CXCR1P25024 350 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 MVKQ03426 396 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 GSTA3Q16772 222 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 CCDC153Q494R4 210 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 AVPI1Q5T686 147 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 PRAMEF8Q5VWM4 474 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 PRAMEF7Q5VXH5 474 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 HOMEZQ8IX15 550 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 CLECL1Q8IZS7 167 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 MZB1Q8WU39 189 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 ZNF837Q96EG3 531 aaPredicted RBP16.25■□□□□ 0.19
SORT1-203ENST00000471996 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 DUX5Q96PT3 197 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 C1orf50Q9BV19 199 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 GPR35Q9HC97 309 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 B3GNT2Q9NY97 397 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 NOX1Q9Y5S8 564 aa16.25■□□□□ 0.19
SORT1-203ENST00000471996 NUP214P35658 2090 aaPredicted RBP16.25■□□□□ 0.19
SORT1-203ENST00000471996 CFAP73A6NFT4 308 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 DNAJC9-AS1A6NH13 148 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 IGHV2-5P01817 119 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 FGF4P08620 206 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 UQCRBP14927 111 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 CPA3P15088 417 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 ECHS1P30084 290 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 EPS8Q12929 822 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 UGT3A2Q3SY77 523 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 IL23RQ5VWK5 629 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 TNFAIP8L2Q6P589 184 aaPredicted RBP16.24■□□□□ 0.19
SORT1-203ENST00000471996 GSPT2Q8IYD1 628 aaKnown RBP16.24■□□□□ 0.19
SORT1-203ENST00000471996 SYT14Q8NB59 555 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 IFT81Q8WYA0 676 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 ZDHHC2Q9UIJ5 367 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 RCE1Q9Y256 329 aa16.24■□□□□ 0.19
SORT1-203ENST00000471996 PRAMEF27A3QJZ7 478 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 TMEM233B4DJY2 109 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 FRS3O43559 492 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 MAGEB1P43366 347 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 CLDN17P56750 224 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 RPS23P62266 143 aaKnown RBP16.23■□□□□ 0.19
SORT1-203ENST00000471996 BNIP2Q12982 314 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 FXNQ16595 210 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 CEACAM16Q2WEN9 425 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 PGS1Q32NB8 556 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 TRMT5Q32P41 509 aaKnown RBP16.23■□□□□ 0.19
SORT1-203ENST00000471996 GPAT3Q53EU6 434 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 XKR7Q5GH72 579 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 C1orf147Q96MC9 270 aaPredicted RBP16.23■□□□□ 0.19
SORT1-203ENST00000471996 GATA5Q9BWX5 397 aaPredicted RBP16.23■□□□□ 0.19
SORT1-203ENST00000471996 DUSP13Q9UII6 198 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 ZNF346Q9UL40 294 aaKnown RBP16.23■□□□□ 0.19
SORT1-203ENST00000471996 FZR1Q9UM11 496 aa16.23■□□□□ 0.19
SORT1-203ENST00000471996 A0A1W2PPM1 405 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 AGAP5A6NIR3 686 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 A8MVM7 634 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 CDC14BO60729 498 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 SLC43A1O75387 559 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 HLA-HP01893 362 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 ZNF14P17017 642 aaPredicted RBP16.22■□□□□ 0.19
SORT1-203ENST00000471996 CASQ1P31415 396 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 HPCAP84074 193 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 MMEL1Q495T6 779 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 C6orf136Q5SQH8 315 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 GKAP1Q5VSY0 366 aaPredicted RBP16.22■□□□□ 0.19
SORT1-203ENST00000471996 CNPY4Q8N129 248 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 KDM8Q8N371 416 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 GPR137CQ8N3F9 429 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 CCDC63Q8NA47 563 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 KIF18AQ8NI77 898 aa16.22■□□□□ 0.19
SORT1-203ENST00000471996 ZNF75AQ96N20 296 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms