RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, human

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD6-208	ENST00000471682	OR4K5	Q8NGD3	323 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	OR4C15	Q8NGM1	316 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	OR52J3	Q8NH60	311 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	ZNF417	Q8TAU3	575 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	HIST1H2AC	Q93077	130 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	TMEM45B	Q96B21	275 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	DNAJA3	Q96EY1	480 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	OXGR1	Q96P68	337 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	PLSCR4	Q9NRQ2	329 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	C20orf141	Q9NUB4	165 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	DNAJB9	Q9UBS3	223 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	AP4S1	Q9Y587	144 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	LRRK2	Q5S007	2527 aa		13.6	□□□□□ -0.23
COMMD6-208	ENST00000471682	ARRDC5	A6NEK1	342 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	PLPP3	O14495	311 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	MSTN	O14793	375 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	HNRNPR	O43390	633 aa	Known RBP	13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	DEAF1	O75398	565 aa	Predicted RBP	13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	CLDN14	O95500	239 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	KLK2	P20151	261 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	PUDP	Q08623	228 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	PMS2P3	Q13401	168 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	SEC23B	Q15437	767 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	FBXL19-AS1	Q494R0	122 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	PXK	Q7Z7A4	578 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	GALNT5	Q7Z7M9	940 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	CCDC71	Q8IV32	467 aa	Predicted RBP	13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	TUSC5	Q8IXB3	177 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	GCNT2	Q8N0V5	402 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	OR9K2	Q8NGE7	335 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	CA5BP1	Q8WTZ4	195 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	STARD4	Q96DR4	205 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	DENND2D	Q9H6A0	471 aa	Predicted RBP	13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	PARPBP	Q9NWS1	579 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	JKAMP	Q9P055	326 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	B3GAT1	Q9P2W7	334 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	NOX1	Q9Y5S8	564 aa		13.59	□□□□□ -0.23
COMMD6-208	ENST00000471682	EFCAB9	A8MZ26	197 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	MS4A18	H0YCH9	400 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	RAMP1	O60894	148 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	OR6A2	O95222	327 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	CNOT4	O95628	575 aa	Known RBP	13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	CGA	P01215	116 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	PTN	P21246	168 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	DNAJA1	P31689	397 aa	Known RBP	13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	OMP	P47874	163 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	RPS4X	P62701	263 aa	Known RBP	13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	KPNB1	Q14974	876 aa	Known RBP	13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	EXOC3L2	Q2M3D2	409 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	MS4A18	Q3C1V0	323 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	C1orf94	Q6P1W5	598 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	TBPL2	Q6SJ96	375 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	NANOGNB	Q7Z5D8	188 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	LIX1L	Q8IVB5	337 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	CNEP1R1	Q8N9A8	125 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	NRBF2	Q96F24	287 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	PROCR	Q9UNN8	238 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	HIF3A	Q9Y2N7	669 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	FLVCR1	Q9Y5Y0	555 aa		13.58	□□□□□ -0.24
COMMD6-208	ENST00000471682	NPIPB13	A6NJU9	1138 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	NPIPB4	C9JG80	1138 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	LRRN3	E7EW58	273 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	GNGT2	O14610	69 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	CLOCK	O15516	846 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	KLF4	O43474	513 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	AKAP8	O43823	692 aa	Known RBP	13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	PIP5K1C	O60331	668 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	OR10H3	O60404	316 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	ADORA3	P0DMS8	318 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	SAG	P10523	405 aa	Predicted RBP	13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	ZNF43	P17038	809 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	MAK	P20794	623 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	BMP5	P22003	454 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	FAS	P25445	335 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	UQCRC1	P31930	480 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	ARHGDIA	P52565	204 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	PRPS1	P60891	318 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	LSM11	P83369	360 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	TAF11	Q15544	211 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	ATP6AP1	Q15904	470 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	MICA	Q29983	383 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	CREB3L2	Q70SY1	520 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	BTLA	Q7Z6A9	289 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	GPAT4	Q86UL3	456 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	STK32C	Q86UX6	486 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	LRRC17	Q8N6Y2	441 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	RELL2	Q8NC24	303 aa	Predicted RBP	13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	ANKK1	Q8NFD2	765 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	LRRC46	Q96FV0	321 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	BDH2	Q9BUT1	245 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	KCNJ16	Q9NPI9	418 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	TAS2R5	Q9NYW4	299 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	RCE1	Q9Y256	329 aa		13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	NOSIP	Q9Y314	301 aa	Known RBP	13.57	□□□□□ -0.24
COMMD6-208	ENST00000471682	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms