RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 OR12D2P58182 307 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SNRPNP63162 240 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 TNFRSF9Q07011 255 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FOXO1Q12778 655 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CNTN1Q12860 1018 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 MPPED2Q15777 294 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ENPP7Q6UWV6 458 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SPNS3Q6ZMD2 512 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RNF165Q6ZSG1 346 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PLPPR4Q7Z2D5 763 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ADCK2Q7Z695 626 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TRAPPC5Q8IUR0 188 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF615Q8N8J6 731 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OR4C16Q8NGL9 310 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CD99L2Q8TCZ2 262 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SECTM1Q8WVN6 248 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 IGSF8Q969P0 613 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OTUB2Q96DC9 234 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SCARF2Q96GP6 870 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 OR14A2Q96R54 314 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 GPR61Q9BZJ8 451 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZDHHC5Q9C0B5 715 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CHST5Q9GZS9 411 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FAM212BQ9NTI7 297 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 MRPS18AQ9NVS2 196 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 FBXO4Q9UKT5 387 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SCML2Q9UQR0 700 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PRG3Q9Y2Y8 225 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 MMP24Q9Y5R2 645 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 A0A1W2PQH9 124 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CPED1A4D0V7 1026 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 KDM4EB2RXH2 506 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 H3BSH0 61 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 GFYI3L273 518 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 DCTN6O00399 190 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CTDSPLO15194 276 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 INSIG1O15503 277 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF208O43345 1280 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 EMC8O43402 210 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FRS3O43559 492 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ETHE1O95571 254 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 NTN1O95631 604 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SLC25A27O95847 323 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 HOXB5P09067 269 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF286BP0CG31 522 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 EPCAMP16422 314 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 HOXA5P20719 270 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 C5AR1P21730 350 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CDK2P24941 298 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CD34P28906 385 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 GJA4P35212 333 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RGS19P49795 217 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 NRG3P56975 720 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PCBP3P57721 371 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 TAS2R50P59544 299 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RPS13P62277 151 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 LSM6P62312 80 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 CXADRP78310 365 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 NKX6-1P78426 367 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 HSPB3Q12988 150 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SERINC3Q13530 473 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FNDC3BQ53EP0 1204 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 EXOSC6Q5RKV6 272 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 SLC25A30Q5SVS4 291 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ARHGAP40Q5TG30 622 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 LIPJQ5W064 366 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FBXL22Q6P050 247 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF585AQ6P3V2 769 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 C1orf229Q6ZS94 237 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 KCTD9Q7L273 389 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 BHLHA9Q7RTU4 235 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 LRRC70Q7Z2Q7 622 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TIPARPQ7Z3E1 657 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 BAP18Q8IXM2 172 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 THEM5Q8N1Q8 247 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FRMD1Q8N878 549 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF248Q8NDW4 579 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SEMA6DQ8NFY4 1073 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 OR56B1Q8NGI3 324 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CASTOR1Q8WTX7 329 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CCDC107Q8WV48 283 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 DCUN1D4Q92564 292 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SLC25A38Q96DW6 304 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 NRSN2Q9GZP1 204 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PARP12Q9H0J9 701 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 ATG5Q9H1Y0 275 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 POFUT1Q9H488 388 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PTGES2Q9H7Z7 377 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SFXN1Q9H9B4 322 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 KRCC1Q9NPI7 259 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 HINT3Q9NQE9 182 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 DOK5Q9P104 306 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 IL17BQ9UHF5 180 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FBXL4Q9UKA2 621 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 FBXL21Q9UKT6 434 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TNFSF18Q9UNG2 199 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 ACOD1A6NK06 481 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PRAMEF4O60810 478 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CLDN11O75508 207 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms