RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 RBKSQ9H477 322 aa2.58□□□□□ -2
BRCA2-202ENST00000470094 REEP4Q9H6H4 257 aa2.58□□□□□ -2
BRCA2-202ENST00000470094 NIPAL2Q9H841 368 aa2.58□□□□□ -2
BRCA2-202ENST00000470094 GLRX2Q9NS18 164 aa2.58□□□□□ -2
BRCA2-202ENST00000470094 PSMC3IPQ9P2W1 217 aaPredicted RBP2.58□□□□□ -2
BRCA2-202ENST00000470094 TMCO1Q9UM00 188 aa2.58□□□□□ -2
BRCA2-202ENST00000470094 RPL36Q9Y3U8 105 aaKnown RBP2.58□□□□□ -2
BRCA2-202ENST00000470094 CSDC2Q9Y534 153 aaKnown RBP2.58□□□□□ -2
BRCA2-202ENST00000470094 TTC21BQ7Z4L5 1316 aa2.58□□□□□ -2
BRCA2-202ENST00000470094 TCRBV9S1A1TA0A576 114 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 GFYI3L273 518 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 CTAG2O75638 210 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 OXSR1O95747 527 aaPredicted RBP2.57□□□□□ -2
BRCA2-202ENST00000470094 ASGR1P07306 291 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 ANXA8P13928 327 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 HOXD10P28358 340 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 CALCRP30988 508 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 RBMXP38159 391 aaKnown RBP2.57□□□□□ -2
BRCA2-202ENST00000470094 PLK1P53350 603 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 BIDP55957 195 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 SCRN3Q0VDG4 424 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 PPP1R7Q15435 360 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 AANATQ16613 207 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 DGUOKQ16854 277 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 MICBQ29980 383 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 SPANXN2Q5MJ10 180 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 C1orf185Q5T7R7 199 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 ANXA8L1Q5VT79 327 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 RAET1LQ5VY80 246 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 BIVMQ86UB2 503 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 ENTHD1Q8IYW4 607 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 CEP112Q8N8E3 955 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 LINC01555Q8NAE3 123 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 SPATA4Q8NEY3 305 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 OR52H1Q8NGJ2 320 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 MCUR1Q96AQ8 359 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 IFT74Q96LB3 600 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 KCNA7Q96RP8 456 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 ILKAPQ9H0C8 392 aaPredicted RBP2.57□□□□□ -2
BRCA2-202ENST00000470094 PPA2Q9H2U2 334 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 OR51J1Q9H342 316 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 NANOGQ9H9S0 305 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 MYOZ2Q9NPC6 264 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 DDX18Q9NVP1 670 aaKnown RBP2.57□□□□□ -2
BRCA2-202ENST00000470094 MARCH5Q9NX47 278 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 KIAA1257Q9ULG3 409 aa2.57□□□□□ -2
BRCA2-202ENST00000470094 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.57□□□□□ -2
BRCA2-202ENST00000470094 IGHV7-81A0A0B4J1V7 117 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 SERTM2A0A1B0GWG4 89 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 CCDC182A6NF36 153 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 C9JVG2 144 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 H0YIV9 168 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 HIP1O00291 1037 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 DCTN6O00399 190 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 STAMBPO95630 424 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 MMP1P03956 469 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 IGKV3-11P04433 115 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 HPNP05981 417 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 OR8U8P0C7N1 319 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 RBMY1CP0DJD4 496 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ZNF17P17021 662 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ZNF32P17041 273 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 TNNI1P19237 187 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 KITLGP21583 273 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 CHMLP26374 656 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ANXA13P27216 316 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 IL12AP29459 219 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 NTSP30990 170 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 DDOSTP39656 456 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 TIMM10P62072 90 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 PPIL2Q13356 520 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 OR5I1Q13606 314 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ARL6IP1Q15041 203 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 LRRC36Q1X8D7 754 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 NSUN5P1Q3KNT7 163 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 LRRC31Q6UY01 552 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ARCQ7LC44 396 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ZNF589Q86UQ0 364 aaPredicted RBP2.56□□□□□ -2
BRCA2-202ENST00000470094 NUDCD3Q8IVD9 361 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 NRMQ8IXM6 262 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 GTPBP8Q8N3Z3 284 aaPredicted RBP2.56□□□□□ -2
BRCA2-202ENST00000470094 AGR3Q8TD06 166 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ELMO1Q92556 727 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 SEC22AQ96IW7 307 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 OXGR1Q96P68 337 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 MBOAT4Q96T53 435 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 CNN2Q99439 309 aaKnown RBP2.56□□□□□ -2
BRCA2-202ENST00000470094 CHP1Q99653 195 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 GAL3ST1Q99999 423 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 EBF4Q9BQW3 602 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 NEK6Q9HC98 313 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ZNF160Q9HCG1 818 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 THUMPD1Q9NXG2 353 aaKnown RBP2.56□□□□□ -2
BRCA2-202ENST00000470094 CD274Q9NZQ7 290 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 STAP1Q9ULZ2 295 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 KCNIP3Q9Y2W7 256 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 STARD10Q9Y365 291 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 CLSPNQ9HAW4 1339 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 ATP10AO60312 1499 aa2.56□□□□□ -2
BRCA2-202ENST00000470094 IGHV1OR21-1A0A087WYE8 117 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms