RNA–Protein interactions for RNA: ENST00000469476.2

TRIT1-208, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-208ENST00000469476 HIPK2Q9H2X6 1198 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 ATP13A3Q9H7F0 1226 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 CALHM2Q9HA72 323 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 POPDC2Q9HBU9 364 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 UBE2TQ9NPD8 197 aaPredicted RBP4.04□□□□□ -1.76
TRIT1-208ENST00000469476 FANCFQ9NPI8 374 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 STMN3Q9NZ72 180 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 IL17CQ9P0M4 197 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 B9D1Q9UPM9 204 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 KLHDC2Q9Y2U9 406 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 WIPI2Q9Y4P8 454 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 PCDHGB1Q9Y5G3 927 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 SNX10Q9Y5X0 201 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 PKD1L1Q8TDX9 2849 aa4.04□□□□□ -1.76
TRIT1-208ENST00000469476 ANKRD36A6QL64 1941 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 CUBNO60494 3623 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 IGLV3-10A0A075B6K4 115 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 IGHV5-51A0A0C4DH38 117 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 A0A1B0GUV1 79 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 OR5K4A6NMS3 321 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 SDHDO14521 159 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 PHF1O43189 567 aaPredicted RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 TSC22D2O75157 780 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 CDC123O75794 336 aaPredicted RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 TOXO94900 526 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 ANGPTL1O95841 491 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 MBD3O95983 291 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 CLPTM1O96005 669 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 HPRP00739 348 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 ANXA4P09525 319 aaPredicted RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 AMD1P17707 334 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 PAX7P23759 505 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 TEAD1P28347 426 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 SOX3P41225 446 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 RPS4XP62701 263 aaKnown RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 HERVK_113P63132 956 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 ERVK-8P63133 956 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 NAAAQ02083 359 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 P2RY14Q15391 338 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 TAB1Q15750 504 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 KNOP1Q1ED39 458 aaKnown RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 KIAA1644Q3SXP7 199 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 GTDC1Q4AE62 458 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 DOK6Q6PKX4 331 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 PAMR1Q6UXH9 720 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 CERS6Q6ZMG9 384 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 ZNF730Q6ZMV8 503 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 FAM92BQ6ZTR7 304 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 C9orf139Q6ZV77 190 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 LRRC70Q7Z2Q7 622 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 CDC20BQ86Y33 519 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 DEFB106AQ8N104 65 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 EIF1ADQ8N9N8 165 aaKnown RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 TUBGCP3Q96CW5 907 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 ZNF501Q96CX3 271 aaPredicted RBP4.03□□□□□ -1.76
TRIT1-208ENST00000469476 VSTM2LQ96N03 204 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 CCT7Q99832 543 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 ERVK-6Q9BXR3 956 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 ZFP57Q9NU63 452 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 SLC6A5Q9Y345 797 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 VPS13CQ709C8 3753 aa4.03□□□□□ -1.76
TRIT1-208ENST00000469476 AKAP6Q13023 2319 aa4.03□□□□□ -1.77
TRIT1-208ENST00000469476 TGP01266 2768 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 PIKFYVEQ9Y2I7 2098 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 NOTCH1P46531 2555 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 NKX2-6A6NCS4 301 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 MSGN1A6NI15 193 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 SLCO1B7G3V0H7 640 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 H3BTX0 84 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 M0QYV0 167 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 TRMUO75648 421 aaKnown RBP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 IGSF6O95976 241 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 FCER2P06734 321 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 PAEPP09466 180 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 XRCC1P18887 633 aaPredicted RBP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 CHI3L1P36222 383 aaPredicted RBP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 FOXG1P55316 489 aaPredicted RBP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 XGP55808 180 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 PPIAP62937 165 aaKnown RBP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 ARL16Q0P5N6 197 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 CUL2Q13617 745 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 EXOSC2Q13868 293 aaKnown RBP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 EFTUD2Q15029 972 aaKnown RBP eCLIP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 PARP6Q2NL67 630 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 KRTAP24-1Q3LI83 254 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 STEAP1BQ6NZ63 245 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 SPSB3Q6PJ21 355 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 LRRC31Q6UY01 552 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 CCDC73Q6ZRK6 1079 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 SH2D5Q6ZV89 423 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 CENPUQ71F23 418 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 SMIM29Q86T20 159 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 SLC22A15Q8IZD6 547 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 LINC00518Q8N0U6 118 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 ARFGAP2Q8N6H7 521 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 RELL2Q8NC24 303 aaPredicted RBP4.02□□□□□ -1.77
TRIT1-208ENST00000469476 DDHD1Q8NEL9 900 aa4.02□□□□□ -1.77
TRIT1-208ENST00000469476 OR5T2Q8NGG2 359 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms