RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 RPS5P46782 204 aaKnown RBP12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 IDH3AP50213 366 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 KLHL24Q6TFL4 600 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 COMTD1Q86VU5 262 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 C10orf105Q8TEF2 133 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 PROX1Q92786 737 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 TAAR8Q969N4 342 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLC25A36Q96CQ1 311 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 C7orf26Q96N11 449 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 OXGR1Q96P68 337 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 ZNF317Q96PQ6 595 aaPredicted RBP12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLC38A2Q96QD8 506 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 NELFAQ9H3P2 528 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 CACYBPQ9HB71 228 aaKnown RBP12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 TCF7L2Q9NQB0 619 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 B3GAT1Q9P2W7 334 aa12.89□□□□□ -0.35
SDCCAG3-209ENST00000468963 TRBV5-3A0A0A0MS03 114 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 LOC102725191A0A1B0GVB3 256 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 A0A1B0GWA3 101 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 TPST1O60507 370 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 LY6HO94772 140 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 IGLV1-44P01699 117 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 ARAFP10398 606 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 HTR2AP28223 471 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 VLDLRP98155 873 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 C3orf36Q3SXR2 165 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 PAGE3Q5JUK9 113 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 AGBL2Q5U5Z8 902 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 HMBOX1Q6NT76 420 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 NET1Q7Z628 596 aaPredicted RBP12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 GOLGA6L1Q8N7Z2 621 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 FAM169BQ8N8A8 192 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 NFKBIDQ8NI38 313 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 FAM168AQ92567 244 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 EBF4Q9BQW3 602 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 CCDC28BQ9BUN5 200 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLCO1B3Q9NPD5 702 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 VAPAQ9P0L0 249 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 SEC14L4Q9UDX3 406 aa12.88□□□□□ -0.35
SDCCAG3-209ENST00000468963 MALRD1Q5VYJ5 2156 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 IGKV1D-42A0A075B6H8 117 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 A0A096LPE4 126 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 A0A1W2PPZ6 126 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 C5orf58C9J3I9 102 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 MS4A18H0YCH9 400 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 OR2T1O43869 369 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 ERLIN1O75477 346 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 ZNF43P17038 809 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 GPX2P18283 190 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 SERPINF1P36955 418 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 CLDN17P56750 224 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 ARF1P84077 181 aaKnown RBP12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 CDK6Q00534 326 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 ROR2Q01974 943 aaKnown RBP12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 MS4A18Q3C1V0 323 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 C6orf52Q5T4I8 152 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 REEP3Q6NUK4 255 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 DHRS4L2Q6PKH6 230 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 NHLRC1Q6VVB1 395 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 DNAJA4Q8WW22 397 aaPredicted RBP12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 SPDL1Q96EA4 605 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 ALKBH3Q96Q83 286 aaPredicted RBP12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 KATNB1Q9BVA0 655 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 IKZF5Q9H5V7 419 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 CCDC167Q9P0B6 97 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 RPS6KB2Q9UBS0 482 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 RCE1Q9Y256 329 aa12.87□□□□□ -0.35
SDCCAG3-209ENST00000468963 VWC2LB2RUY7 222 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 POLR3GO15318 223 aaPredicted RBP12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 TPST2O60704 377 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 IGKV3-15P01624 115 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 CRYAAP02489 173 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 CSF3P09919 207 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 CECR9P0C854 216 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 CBR1P16152 277 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 SH3BGRP55822 239 aaPredicted RBP12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 UBE2NP61088 152 aaKnown RBP12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 STX1BP61266 288 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 TUBA1BP68363 451 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 TUBA4AP68366 448 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 NAAAQ02083 359 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 HGFACQ04756 655 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 ADRM1Q16186 407 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 GCNT6Q5T4J0 391 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 FAM69AQ5T7M9 428 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 PODNL1Q6PEZ8 512 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 C5orf46Q6UWT4 87 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 TUBA1AQ71U36 451 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 H1FNTQ75WM6 255 aaPredicted RBP12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 SLC38A4Q969I6 547 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 ZNF837Q96EG3 531 aaPredicted RBP12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 WFDC6Q9BQY6 131 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 TMEM38AQ9H6F2 299 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 SEC61A2Q9H9S3 476 aa12.86□□□□□ -0.35
SDCCAG3-209ENST00000468963 GPR35Q9HC97 309 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms