RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 KCNJ10P78508 379 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 IL5RAQ01344 420 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 IL1RL1Q01638 556 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 CHRNEQ04844 493 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 GALNT5Q7Z7M9 940 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 CYP4Z1Q86W10 505 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 SLC30A8Q8IWU4 369 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 TMEM234Q8WY98 164 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 OSTF1Q92882 214 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 MAL2Q969L2 176 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 CPNE4Q96A23 557 aaPredicted RBP12.93□□□□□ -0.34
COL27A1-203ENST00000468565 ZNF524Q96C55 264 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 DOK1Q99704 481 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 APOL4Q9BPW4 351 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 TMEM38AQ9H6F2 299 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 TIGARQ9NQ88 270 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 EXOSC3Q9NQT5 275 aaKnown RBP12.93□□□□□ -0.34
COL27A1-203ENST00000468565 RASSF1Q9NS23 344 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.93□□□□□ -0.34
COL27A1-203ENST00000468565 DNAJB12Q9NXW2 375 aaKnown RBP12.93□□□□□ -0.34
COL27A1-203ENST00000468565 ELOVL5Q9NYP7 299 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 ITGB1BP2Q9UKP3 347 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 EMC9Q9Y3B6 208 aa12.93□□□□□ -0.34
COL27A1-203ENST00000468565 CCDC168Q8NDH2 2452 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SLC1A7O00341 560 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 MITFO75030 526 aaPredicted RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 DIRAS1O95057 198 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 CCDC159P0C7I6 412 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ETFAP13804 333 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 NID1P14543 1247 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 PGCP20142 388 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SHC1P29353 583 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 AQP1P29972 269 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SFTPDP35247 375 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 MVDP53602 400 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 CARD18P57730 90 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SELENOWP63302 87 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SCARB2Q14108 478 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SYPL1Q16563 259 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 COX20Q5RI15 118 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 CMIPQ8IY22 773 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ATG16L2Q8NAA4 619 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 OR6K3Q8NGY3 331 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 LINC01560Q8TB33 94 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 FBLIM1Q8WUP2 373 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ZNF566Q969W8 418 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 C7orf34Q96L11 122 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 DACH2Q96NX9 599 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 OPN3Q9H1Y3 402 aaPredicted RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SLC38A1Q9H2H9 487 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 KRT84Q9NSB2 600 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 THUMPD1Q9NXG2 353 aaKnown RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 PROCRQ9UNN8 238 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 CYP7B1O75881 506 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 PLGP00747 810 aaPredicted RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 POLR2IP36954 125 aaKnown RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 CD79BP40259 229 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 CDK5R2Q13319 367 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ZNF239Q16600 458 aaKnown RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 IFI44LQ53G44 452 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 GTF2IRD2BQ6EKJ0 949 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ZNF474Q6S9Z5 364 aaPredicted RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 CCDC80Q76M96 950 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 GTF2IRD2Q86UP8 949 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 SPARTQ8N0X7 666 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ZG16BQ96DA0 208 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ZNF347Q96SE7 839 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 POLDIP3Q9BY77 421 aaKnown RBP12.92□□□□□ -0.34
COL27A1-203ENST00000468565 ANGPT4Q9Y264 503 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 GMPPBQ9Y5P6 360 aa12.92□□□□□ -0.34
COL27A1-203ENST00000468565 OTOGQ6ZRI0 2925 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 AKAP6Q13023 2319 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 FREM1Q5H8C1 2179 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 AGAP5A6NIR3 686 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 H3BMQ9 156 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 SEC14L2O76054 403 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 CHRM4P08173 479 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 NR2F1P10589 423 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 RPS4Y1P22090 263 aaKnown RBP12.91□□□□□ -0.34
COL27A1-203ENST00000468565 TMBIM6P55061 237 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 CDK6Q00534 326 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 LAPTM4AQ15012 233 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 TMEM176BQ3YBM2 270 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-203ENST00000468565 C3orf33Q6P1S2 294 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 FAHD1Q6P587 224 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 NFKBIDQ8NI38 313 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 RNF128Q8TEB7 428 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 COG8Q96MW5 612 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 CLEC4MQ9H2X3 399 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-203ENST00000468565 MTHFD2LQ9H903 347 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-203ENST00000468565 PLSCR4Q9NRQ2 329 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 ACER3Q9NUN7 267 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 P2RX2Q9UBL9 471 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 AKAP9Q99996 3911 aa12.91□□□□□ -0.34
COL27A1-203ENST00000468565 SH3D21A4FU49 640 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 GCM2O75603 506 aaPredicted RBP12.9□□□□□ -0.34
COL27A1-203ENST00000468565 ITGA2P17301 1181 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 CRYBA2P53672 197 aa12.9□□□□□ -0.34
COL27A1-203ENST00000468565 CTBP2P56545 445 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms