RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SLC30A6Q6NXT4 461 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 C19orf48Q6RUI8 117 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TBPL2Q6SJ96 375 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ZBTB49Q6ZSB9 765 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RRM2BQ7LG56 351 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TSEN54Q7Z6J9 526 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TMEM179BQ7Z7N9 219 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 MRGPRGQ86SM5 289 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RANBP3LQ86VV4 465 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 MEX3DQ86XN8 651 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 P3H2Q8IVL5 708 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 NKAIN4Q8IVV8 208 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 HS3ST5Q8IZT8 346 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SPARTQ8N0X7 666 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 POGLUT1Q8NBL1 392 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PAPD5Q8NDF8 572 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 C17orf47Q8NEP4 570 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 OR2T29Q8NH02 315 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 OR5K1Q8NHB7 308 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 B4GALNT2Q8NHY0 566 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 APOBEC4Q8WW27 367 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PMM1Q92871 262 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 POP5Q969H6 163 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SDCCAG3Q96C92 435 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 DUS3LQ96G46 650 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC41A3Q96GZ6 507 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 CENPNQ96H22 339 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 C7orf34Q96L11 122 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 C5orf34Q96MH7 638 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SIGLEC12Q96PQ1 595 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF347Q96SE7 839 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 BARD1Q99728 777 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PIP5K1AQ99755 562 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 KLHDC3Q9BQ90 382 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF559Q9BR84 538 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 OSBPL11Q9BXB4 747 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 LAT2Q9GZY6 243 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 COQ10BQ9H8M1 238 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 REEP1Q9H902 201 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RNPEPL1Q9HAU8 725 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 IL1RAPQ9NPH3 570 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ARMC1Q9NVT9 282 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 VNN3Q9NY84 501 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 NDUFAF4Q9P032 175 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 PDP1Q9P0J1 537 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 STX18Q9P2W9 335 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 DNAJB9Q9UBS3 223 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RIMS3Q9UJD0 308 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 TMCC3Q9ULS5 477 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC7A7Q9UM01 511 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 VDAC3Q9Y277 283 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC35A3Q9Y2D2 325 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 RPH3AQ9Y2J0 694 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 SAMHD1Q9Y3Z3 626 aaKnown RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 MAGED1Q9Y5V3 778 aaPredicted RBP3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 ENPP4Q9Y6X5 453 aa3.69□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A0G2JMM0 328 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TRBV4-1A0A0J9YWV2 114 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A1B0GWA3 101 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A1W2PPB8 328 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A1W2PQD3 144 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 A0A1W2PRS3 328 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TRAPPC13A5PLN9 417 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PINLYPA6NC86 204 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 OR5H15A6NDH6 313 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ANKUB1A6NFN9 424 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 FAM166BA8MTA8 275 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 KIR3DP1A8MWS1 328 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 VWC2LB2RUY7 222 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 G3V2T6 193 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 FFAR1O14842 300 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 OR10H3O60404 316 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 EIF4E2O60573 245 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 SLC25A12O75746 678 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CCNB2O95067 398 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 RASAL1O95294 804 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 THY1P04216 161 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 SP1P08047 785 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TFPIP10646 304 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 POU2F1P14859 743 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 UQCRBP14927 111 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 PGCP20142 388 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 BTF3P20290 206 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CBLP22681 906 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 CXCR1P25024 350 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 HTR2AP28223 471 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TACR3P29371 465 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ACAA2P42765 397 aaKnown RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 HTR3AP46098 478 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 P2RX1P51575 399 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF41P51814 821 aaPredicted RBP3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ZNF136P52737 540 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 GAS1P54826 345 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TMPRSS3P57727 454 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 SMIM11AP58511 58 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 TLE3Q04726 772 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 ST3GAL3Q11203 375 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 MERTKQ12866 999 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 EPS8Q12929 822 aa3.68□□□□□ -1.82
TMEM39A-204ENST00000468545 MFAP5Q13361 173 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms