RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 KDM8Q8N371 416 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 TRIML2Q8N7C3 387 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 ANKK1Q8NFD2 765 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 PNPT1Q8TCS8 783 aaKnown RBP11.29□□□□□ -0.6
PTPN7-207ENST00000468385 ZFAND2BQ8WV99 257 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 CKAP2Q8WWK9 683 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 PKNOX2Q96KN3 472 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 PTDSS2Q9BVG9 487 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 C20orf27Q9GZN8 174 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 TPK1Q9H3S4 243 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 DYNLRB1Q9NP97 96 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 CHST2Q9Y4C5 530 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 DSPPQ9NZW4 1301 aa11.29□□□□□ -0.6
PTPN7-207ENST00000468385 A0A0A6YYJ9 748 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 SLCO1B7G3V0H7 640 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 GSNP06396 782 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 PNMTP11086 282 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 PRG2P13727 222 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 PCMT1P22061 227 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 IL12AP29459 219 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 ARR3P36575 388 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 ANXA11P50995 505 aaKnown RBP11.28□□□□□ -0.6
PTPN7-207ENST00000468385 NME5P56597 212 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 CLDN17P56750 224 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 ABCE1P61221 599 aaKnown RBP11.28□□□□□ -0.6
PTPN7-207ENST00000468385 COPZ1P61923 177 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 UFM1P61960 85 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 IL1RL1Q01638 556 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 POU3F1Q03052 451 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-207ENST00000468385 NPRL3Q12980 569 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 SNTB2Q13425 540 aaKnown RBP11.28□□□□□ -0.6
PTPN7-207ENST00000468385 MSMPQ1L6U9 139 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 LIN52Q52LA3 116 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 ELFN2Q5R3F8 820 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 KRT80Q6KB66 452 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 MDP1Q86V88 176 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 LRRC34Q8IZ02 419 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF454Q8N9F8 522 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 OR52P1PQ8NH57 321 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 MFSD8Q8NHS3 518 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 STK35Q8TDR2 534 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 ZNF837Q96EG3 531 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-207ENST00000468385 PANX1Q96RD7 426 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 METTL17Q9H7H0 456 aaPredicted RBP11.28□□□□□ -0.6
PTPN7-207ENST00000468385 NOX3Q9HBY0 568 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 B3GAT1Q9P2W7 334 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 SEC14L4Q9UDX3 406 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
PTPN7-207ENST00000468385 A0A096LPI6 279 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 WDR91A4D1P6 747 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 B4DSR2 109 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 FZD7O75084 574 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 SERPINE1P05121 402 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 ALDOCP09972 364 aaKnown RBP11.27□□□□□ -0.61
PTPN7-207ENST00000468385 MYZAPP0CAP1 466 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 LBPP18428 481 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 COMPP49747 757 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-207ENST00000468385 MVDP53602 400 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 PRSS12P56730 875 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 EGR4Q05215 589 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 DAG1Q14118 895 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 CHI3L2Q15782 390 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 TUSC1Q2TAM9 212 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 CEACAM16Q2WEN9 425 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 RNF220Q5VTB9 566 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 ZNF621Q6ZSS3 439 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 GLCCI1Q86VQ1 547 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 CARM1Q86X55 608 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 CLIP4Q8N3C7 705 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 CLDND2Q8NHS1 167 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 SLC25A36Q96CQ1 311 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 SORT1Q99523 831 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 NUF2Q9BZD4 464 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 MRPL37Q9BZE1 423 aaKnown RBP11.27□□□□□ -0.61
PTPN7-207ENST00000468385 ZNF443Q9Y2A4 671 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-207ENST00000468385 RAP2CQ9Y3L5 183 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 CMAHPQ9Y471 501 aa11.27□□□□□ -0.61
PTPN7-207ENST00000468385 DYSFO75923 2080 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 FAM157AC9JC47 383 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 SLC43A1O75387 559 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 SEC14L2O76054 403 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 AHSA1O95433 338 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 ZNF43P17038 809 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 EGR1P18146 543 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 NCF2P19878 526 aaPredicted RBP11.26□□□□□ -0.61
PTPN7-207ENST00000468385 NR4A1P22736 598 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 COL8A2P25067 703 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 EVX1P49640 407 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 RPL14P50914 215 aaKnown RBP11.26□□□□□ -0.61
PTPN7-207ENST00000468385 ATG16L1Q676U5 607 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 OGFOD2Q6N063 350 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 SERPINA11Q86U17 422 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 GPR137CQ8N3F9 429 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 IL17RDQ8NFM7 739 aa11.26□□□□□ -0.61
PTPN7-207ENST00000468385 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTPN7-207ENST00000468385 MRPL24Q96A35 216 aaKnown RBP11.26□□□□□ -0.61
PTPN7-207ENST00000468385 TMEM186Q96B77 213 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms