RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SPATA3Q8NHX4 192 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 NFKBIDQ8NI38 313 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 TAAR8Q969N4 342 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 SLC35B4Q969S0 331 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 SORCS2Q96PQ0 1159 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 EBF4Q9BQW3 602 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 SLC52A3Q9NQ40 469 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 PMF1-BGLAPU3KQ54 211 aa21.31■■□□□ 1
PTCH1-210ENST00000468211 IGKV1D-42A0A075B6H8 117 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 ARPC4-TTLL3A0A0A6YYG9 625 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 TPST1O60507 370 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 FZD7O75084 574 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 F12P00748 615 aaPredicted RBP21.3■■□□□ 1
PTCH1-210ENST00000468211 MRPL19P49406 292 aaKnown RBP21.3■■□□□ 1
PTCH1-210ENST00000468211 IDH3AP50213 366 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 ROR2Q01974 943 aaKnown RBP21.3■■□□□ 1
PTCH1-210ENST00000468211 GLIPR1L2Q4G1C9 344 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 PAGE3Q5JUK9 113 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 LRIF1Q5T3J3 769 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 ANKRD16Q6P6B7 361 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 BLOC1S3Q6QNY0 202 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 MYPOPQ86VE0 399 aaPredicted RBP21.3■■□□□ 1
PTCH1-210ENST00000468211 GOLGA6L1Q8N7Z2 621 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 ZNF837Q96EG3 531 aaPredicted RBP21.3■■□□□ 1
PTCH1-210ENST00000468211 LINC00470Q9BZP3 86 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 RAD21L1Q9H4I0 556 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 SLCO1B3Q9NPD5 702 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 TCF7L2Q9NQB0 619 aa21.3■■□□□ 1
PTCH1-210ENST00000468211 CRNNQ9UBG3 495 aaPredicted RBP21.3■■□□□ 1
PTCH1-210ENST00000468211 A0A1B0GWA3 101 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 C5orf58C9J3I9 102 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 CECR9P0C854 216 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 ARAFP10398 606 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 BMP4P12644 408 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 ETS2P15036 469 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 UBE2NP61088 152 aaKnown RBP21.29■■□□□ 1
PTCH1-210ENST00000468211 ARF1P84077 181 aaKnown RBP21.29■■□□□ 1
PTCH1-210ENST00000468211 NAAAQ02083 359 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 C7orf26Q96N11 449 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 KATNB1Q9BVA0 655 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 IKZF5Q9H5V7 419 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 CA10Q9NS85 328 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 VAPAQ9P0L0 249 aa21.29■■□□□ 1
PTCH1-210ENST00000468211 ZNF503-AS2A6NEH8 195 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 OR6C65A6NJZ3 312 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 M0R082 166 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 IGLV1-44P01699 117 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 CELA3BP08861 270 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 IGHV4-31P0DP07 118 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 ZNF43P17038 809 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 CBLP22681 906 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 CALCRP30988 508 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 PRKAR1BP31321 381 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 CHRFAM7AQ494W8 412 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 GCNT6Q5T4J0 391 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 LSMEM1Q8N8F7 131 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 ZNF417Q8TAU3 575 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 MAGEE2Q8TD90 523 aaPredicted RBP21.28■■□□□ 1
PTCH1-210ENST00000468211 OXGR1Q96P68 337 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 ZNF587Q96SQ5 575 aaPredicted RBP21.28■■□□□ 1
PTCH1-210ENST00000468211 WFDC6Q9BQY6 131 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 CCDC167Q9P0B6 97 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 RPS6KB2Q9UBS0 482 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 RCE1Q9Y256 329 aa21.28■■□□□ 1
PTCH1-210ENST00000468211 SVEP1Q4LDE5 3571 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 TRBV5-3A0A0A0MS03 114 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 VWC2LB2RUY7 222 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 RPL36A-HNRNPH2H7BZ11 118 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 POLR3GO15318 223 aaPredicted RBP21.27■■□□□ 1
PTCH1-210ENST00000468211 CRYAAP02489 173 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 GRPRP30550 384 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 SERPINF1P36955 418 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 STX1BP61266 288 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 ADIPOQQ15848 244 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 PODNL1Q6PEZ8 512 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 ANKS4BQ8N8V4 417 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 PROX1Q92786 737 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 SPDL1Q96EA4 605 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 C12orf10Q9HB07 376 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 GPR35Q9HC97 309 aa21.27■■□□□ 1
PTCH1-210ENST00000468211 HPRP00739 348 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 ZNF16P17020 682 aaPredicted RBP21.26■□□□□ 0.99
PTCH1-210ENST00000468211 USF1P22415 310 aaPredicted RBP21.26■□□□□ 0.99
PTCH1-210ENST00000468211 GTF2E2P29084 291 aaKnown RBP21.26■□□□□ 0.99
PTCH1-210ENST00000468211 CDK6Q00534 326 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 HGFACQ04756 655 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 PHYHD1Q5SRE7 291 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 FAM69AQ5T7M9 428 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 REEP3Q6NUK4 255 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 DHRS4L2Q6PKH6 230 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 VHLLQ6RSH7 139 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 KCNK17Q96T54 332 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 KLHL14Q9P2G3 628 aa21.26■□□□□ 0.99
PTCH1-210ENST00000468211 AIM2O14862 343 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 TRAF3IP2O43734 574 aaPredicted RBP21.25■□□□□ 0.99
PTCH1-210ENST00000468211 TPST2O60704 377 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 SLC43A1O75387 559 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 SEC14L2O76054 403 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 IGKV3-15P01624 115 aa21.25■□□□□ 0.99
PTCH1-210ENST00000468211 CSF3P09919 207 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms