RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 IL1RL1Q01638 556 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 EGR4Q05215 589 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 BNIP2Q12982 314 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 MAD2L1Q13257 205 aaPredicted RBP10.47□□□□□ -0.73
UBR4-211ENST00000467272 C1orf140Q5VVS0 124 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 NIPAL3Q6P499 406 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 MDP1Q86V88 176 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 ANKRD46Q86W74 232 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 CCDC36Q8IYA8 594 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 TMEM123Q8N131 208 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 ZDHHC22Q8N966 263 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 IL17RDQ8NFM7 739 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 AGR3Q8TD06 166 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 EPS8L3Q8TE67 593 aaKnown RBP10.47□□□□□ -0.73
UBR4-211ENST00000467272 ZNF418Q8TF45 676 aaPredicted RBP10.47□□□□□ -0.73
UBR4-211ENST00000467272 GCDHQ92947 438 aaPredicted RBP10.47□□□□□ -0.73
UBR4-211ENST00000467272 YIPF5Q969M3 257 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 TUBGCP3Q96CW5 907 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 APOPT1Q96IL0 206 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 CCDC115Q96NT0 180 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 RBM4Q9BWF3 364 aaKnown RBP10.47□□□□□ -0.73
UBR4-211ENST00000467272 GPR35Q9HC97 309 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 RLIMQ9NVW2 624 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 ZNF224Q9NZL3 707 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 SLC17A7Q9P2U7 560 aa10.47□□□□□ -0.73
UBR4-211ENST00000467272 LOC102725191A0A1B0GVB3 256 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 TMPRSS2O15393 492 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 DEAF1O75398 565 aaPredicted RBP10.46□□□□□ -0.73
UBR4-211ENST00000467272 SKAP2O75563 359 aaPredicted RBP10.46□□□□□ -0.73
UBR4-211ENST00000467272 GSNP06396 782 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 DBIP07108 87 aaKnown RBP10.46□□□□□ -0.73
UBR4-211ENST00000467272 ZNF14P17017 642 aaPredicted RBP10.46□□□□□ -0.73
UBR4-211ENST00000467272 LIMS1P48059 325 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 ACTG1P63261 375 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 TXNL4AP83876 142 aaKnown RBP10.46□□□□□ -0.73
UBR4-211ENST00000467272 SCGB2A2Q13296 93 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 SNTB2Q13425 540 aaKnown RBP10.46□□□□□ -0.73
UBR4-211ENST00000467272 DAG1Q14118 895 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 AWAT1Q58HT5 328 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 ANXA8L1Q5VT79 327 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 TMEM225Q6GV28 225 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 WBP2NLQ6ICG8 309 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 ZNF440Q8IYI8 595 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 MFSD8Q8NHS3 518 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 RDH5Q92781 318 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 LRRC37BQ96QE4 947 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 ZNF747Q9BV97 191 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 TMPRSS13Q9BYE2 586 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 TPK1Q9H3S4 243 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 AKTIPQ9H8T0 292 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 ADPRHL2Q9NX46 363 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 REV1Q9UBZ9 1251 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 MARCOQ9UEW3 520 aaPredicted RBP10.46□□□□□ -0.73
UBR4-211ENST00000467272 BTNL2Q9UIR0 455 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 USP22Q9UPT9 525 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 CMAHPQ9Y471 501 aa10.46□□□□□ -0.73
UBR4-211ENST00000467272 A0A096LPI6 279 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 TRAV20A0A0B4J274 112 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 SH3PXD2BA1X283 911 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 VSTM5A8MXK1 200 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 TRIM77I1YAP6 450 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 KRT33AO76009 404 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 NCR1O76036 304 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 PNPP00491 289 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 NUDT17P0C025 328 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 GKN3PP0CG01 181 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 SAGP10523 405 aaPredicted RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 PNMTP11086 282 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 PRG2P13727 222 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 EPHA1P21709 976 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 CXCR1P25024 350 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 GLRXP35754 106 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 ETV4P43268 484 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 GPR6P46095 362 aaPredicted RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 GPAT3Q53EU6 434 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 SPANXN4Q5MJ08 99 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 PHYHD1Q5SRE7 291 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 RNF220Q5VTB9 566 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 C1QL2Q7Z5L3 287 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 RNF130Q86XS8 419 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 RIBC1Q8N443 379 aaPredicted RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 EIF1ADQ8N9N8 165 aaKnown RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 OR51F2Q8NH61 342 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 STK35Q8TDR2 534 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 TEX37Q96LM6 180 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 OR2M2Q96R28 347 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 SLC35A5Q9BS91 424 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 RSPO3Q9BXY4 272 aaPredicted RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 MS4A5Q9H3V2 200 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 DYNLRB1Q9NP97 96 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 ZNF275Q9NSD4 429 aaPredicted RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 TREM2Q9NZC2 230 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 MYEF2Q9P2K5 600 aaKnown RBP10.45□□□□□ -0.74
UBR4-211ENST00000467272 SEC14L4Q9UDX3 406 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 GRIP1Q9Y3R0 1128 aa10.45□□□□□ -0.74
UBR4-211ENST00000467272 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
UBR4-211ENST00000467272 ZNF99A8MXY4 864 aaPredicted RBP10.44□□□□□ -0.74
UBR4-211ENST00000467272 M0R233 179 aa10.44□□□□□ -0.74
UBR4-211ENST00000467272 TRAF3IP2O43734 574 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms