RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DPP4P27487 766 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 RAB13P51153 203 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 NCS1P62166 190 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 RNF4P78317 190 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 SERPINA11Q86U17 422 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 ACOT11Q8WXI4 607 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 ZNF300Q96RE9 604 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 SAV1Q9H4B6 383 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 CDCP1Q9H5V8 836 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 CDHR4A6H8M9 788 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 C4orf47A7E2U8 309 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 MRPS14O60783 128 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 PRAMEF4O60810 478 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 TFPTP0C1Z6 253 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 OR8U8P0C7N1 319 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 GLB1P16278 677 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 SDC1P18827 310 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 HLA-DMAP28067 261 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 PRDX3P30048 256 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 RAD52P43351 418 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 C17orf67Q0P5P2 114 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 PGGHGQ32M88 737 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 RBMS3Q6XE24 437 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 ZFP82Q8N141 532 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 FAM109AQ8N4B1 249 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 SLC35G3Q8N808 338 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 ENDOVQ8N8Q3 282 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 SMOXQ9NWM0 555 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 IL17CQ9P0M4 197 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 DVL1O14640 695 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 PRRG2O14669 202 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 SPINT2O43291 252 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 LCMT2O60294 686 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 AIFM1O95831 613 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 F13BP05160 661 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 HOXB5P09067 269 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 UBCP0CG48 685 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 CTSCP53634 463 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 DVL1P1P54792 670 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 RPS23P62266 143 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 CAMK2BQ13554 666 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 ATPAF1Q5TC12 328 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 METAP1DQ6UB28 335 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 CYS1Q717R9 158 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 ZNF767PQ75MW2 155 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 OVCH1Q7RTY7 1134 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 OR13J1Q8NGT2 312 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 ELMOD3Q96FG2 381 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 THOC3Q96J01 351 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 SLC38A1Q9H2H9 487 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 GPATCH2Q9NW75 528 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 SH2D7A6NKC9 451 aaPredicted RBP8.09□□□□□ -1.12
HPS4-209ENST00000466781 ZNF732B4DXR9 585 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 EIF1BO60739 113 aaKnown RBP8.09□□□□□ -1.12
HPS4-209ENST00000466781 FABP1P07148 127 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 HOXD11P31277 338 aaPredicted RBP8.09□□□□□ -1.12
HPS4-209ENST00000466781 ZNF140P52738 457 aaPredicted RBP8.09□□□□□ -1.12
HPS4-209ENST00000466781 GAB1Q13480 694 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 PROX2Q3B8N5 592 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 SHEQ5VZ18 495 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 GDPD3Q7L5L3 318 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 SYT13Q7L8C5 426 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 OR56B1Q8NGI3 324 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 CMTM2Q8TAZ6 248 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 NANPQ8TBE9 248 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 FNDC8Q8TC99 324 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 ST7LQ8TDW4 575 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 PAQR8Q8TEZ7 354 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 DUSP19Q8WTR2 217 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 TPPP3Q9BW30 176 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 BIN3Q9NQY0 253 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 EBF1Q9UH73 591 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 ATP23Q9Y6H3 246 aa8.09□□□□□ -1.12
HPS4-209ENST00000466781 MYH9P35579 1960 aaKnown RBP8.08□□□□□ -1.12
HPS4-209ENST00000466781 MYH11P35749 1972 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 C2CD4DB7Z1M9 353 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 UTS2O95399 124 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 OR10J4P0C629 311 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 CYB561P49447 251 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 GNB1P62873 340 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 MRPL2Q5T653 305 aaKnown RBP8.08□□□□□ -1.12
HPS4-209ENST00000466781 CPNE4Q96A23 557 aaPredicted RBP8.08□□□□□ -1.12
HPS4-209ENST00000466781 BIRC8Q96P09 236 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 BCL7BQ9BQE9 202 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 THAP7Q9BT49 309 aaPredicted RBP8.08□□□□□ -1.12
HPS4-209ENST00000466781 NUDT9Q9BW91 350 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 SEMA6CQ9H3T2 930 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 WASH6PQ9NQA3 447 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 C1orf123Q9NWV4 160 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 KIAA1456Q9P272 454 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 B4GAT1O43505 415 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 SRFP11831 508 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 TBPP20226 339 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 NFYBP25208 207 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 PLAG1Q6DJT9 500 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 PODNL1Q6PEZ8 512 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 DEDD2Q8WXF8 326 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 ACPTQ9BZG2 426 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms