RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 VRK1Q99986 396 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 SLC46A2Q9BY10 475 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 ACTRT3Q9BYD9 372 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 TCF7L1Q9HCS4 588 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 A0A1W2PPV9 198 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 TMEM218A2RU14 115 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 EIF4E2O60573 245 aaKnown RBP12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 SNRNP200O75643 2136 aaKnown RBP12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 MGMTP16455 207 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 SYN1P17600 705 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 BCL6P41182 706 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 ACTC1P68032 377 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 ACTA1P68133 377 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 REEP5Q00765 189 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 TPGS2Q68CL5 300 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 TMEM64Q6YI46 380 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 MOB3CQ70IA8 216 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 RANBP3LQ86VV4 465 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 ZPLD1Q8TCW7 415 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 SFT2D1Q8WV19 159 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 SOCS4Q8WXH5 440 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 DTD2Q96FN9 168 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 PDCD10Q9BUL8 212 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 TLNRD1Q9H1K6 362 aa12.78□□□□□ -0.36
TGFBR3-204ENST00000465892 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 RFPL4AA6NLU0 287 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 PRR32B1ATL7 298 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 RFPL4AL1F8VTS6 287 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 FADS1O60427 444 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 ADAM11O75078 769 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 OLFM2O95897 454 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 AK4P27144 223 aaPredicted RBP12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 NPBWR1P48145 328 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 PRMT2P55345 433 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 OR7A5Q15622 319 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 OTPQ5XKR4 325 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 RPL22L1Q6P5R6 122 aaKnown RBP12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 C17orf99Q6UX52 265 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 STAC2Q6ZMT1 411 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 OR2L2Q8NH16 312 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 PAQR8Q8TEZ7 354 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 HSPA12BQ96MM6 686 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 NMNAT3Q96T66 252 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 CNN2Q99439 309 aaKnown RBP12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 ADAP2Q9NPF8 381 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 NCDNQ9UBB6 729 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 ABT1Q9ULW3 272 aaKnown RBP12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 MED31Q9Y3C7 131 aa12.77□□□□□ -0.36
TGFBR3-204ENST00000465892 TRAV18A0A075B6X5 111 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 A0A1B0GW55 424 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 OR5H14A6NHG9 310 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 ACAA1P09110 424 aaPredicted RBP12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 DUX4L2P0CJ85 424 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 DUX4L3P0CJ86 424 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 DUX4L4P0CJ87 422 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 DUX4L5P0CJ88 424 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 DUX4L6P0CJ89 424 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 DUX4L7P0CJ90 424 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 LTBQ06643 244 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 LY6G6FQ5SQ64 297 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 H3F3CQ6NXT2 135 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 JMJD6Q6NYC1 403 aaPredicted RBP12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 TMPRSS9Q7Z410 1059 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 SVBPQ8N300 66 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 NR4A3Q92570 626 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 IGSF21Q96ID5 467 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 Q96M85 177 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 ULBP3Q9BZM4 244 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 MTHFD2LQ9H903 347 aaPredicted RBP12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 ZMAT3Q9HA38 289 aaKnown RBP12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 DUX4Q9UBX2 424 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 IER3IP1Q9Y5U9 82 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 ZNF780BQ9Y6R6 833 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 PLXNA2O75051 1894 aa12.77□□□□□ -0.37
TGFBR3-204ENST00000465892 M0QYG6 137 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 OR2T1O43869 369 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 UBBP0CG47 229 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 UBCP0CG48 685 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 RPS27P42677 84 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 PPIAP62937 165 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 RPS27AP62979 156 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 UBA52P62987 128 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 SMAD2Q15796 467 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 PAN3Q58A45 887 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 LRRTM1Q86UE6 522 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 AMZ2Q86W34 360 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 STEAP2Q8NFT2 490 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 OR51D1Q8NGF3 324 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 RXFP4Q8TDU9 374 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 MS4A6EQ96DS6 147 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 NUS1Q96E22 293 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 PRDM7Q9NQW5 492 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 CALML5Q9NZT1 146 aa12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-204ENST00000465892 DHCR7Q9UBM7 475 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms