RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 VRK2Q86Y07 508 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PM20D2Q8IYS1 436 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 MIER2Q8N344 545 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 NATD1Q8N6N6 113 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 METTL25Q8N6Q8 603 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF527Q8NB42 609 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 ATP6V1C2Q8NEY4 427 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SEMA6DQ8NFY4 1073 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 OR10D3Q8NH80 312 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 LINC01560Q8TB33 94 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SLC38A5Q8WUX1 472 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 DYDC1Q8WWB3 177 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 MOAP1Q96BY2 351 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 WFDC6Q9BQY6 131 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PIGQQ9BRB3 760 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 CCDC28BQ9BUN5 200 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 THUMPD3Q9BV44 507 aaKnown RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 ALG8Q9BVK2 526 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 C1orf43Q9BWL3 253 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 OPN3Q9H1Y3 402 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 LIME1Q9H400 295 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PTGES2Q9H7Z7 377 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 COQ10BQ9H8M1 238 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 TPT1P8Q9HAU6 139 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 GPR35Q9HC97 309 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 CHST11Q9NPF2 352 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SDHAF3Q9NRP4 125 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 FGFR1OP2Q9NVK5 253 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 RLIMQ9NVW2 624 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 COQ3Q9NZJ6 369 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 CCDC167Q9P0B6 97 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 VAPAQ9P0L0 249 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 MRTO4Q9UKD2 239 aaKnown RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 CLEC4AQ9UMR7 237 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 WDR45Q9Y484 360 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SPEF1Q9Y4P9 236 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 RAI1Q7Z5J4 1906 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 DSPPQ9NZW4 1301 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ALPK2Q86TB3 2170 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 A0A087WZY1 265 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 A0A0G2JND7 137 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 AGAP5A6NIR3 686 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SLC22A20A6NK97 555 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 DUXAA6NLW8 204 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 HSPB2A8KAH6 182 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 KRTAP29-1A8MX34 341 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF814B7Z6K7 855 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 EEF1E1-BLOC1S5C9J1V9 151 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 GTPBP1O00178 669 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 CLIC1O00299 241 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SYT5O00445 386 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 FBP2O00757 339 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 RFXANKO14593 260 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ADAMDEC1O15204 470 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF264O43296 627 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 EEF1E1O43324 174 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 FRS3O43559 492 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 RAMP1O60894 148 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 STX11O75558 287 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 GCM2O75603 506 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 NUDT14O95848 222 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 CSTAP01040 98 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 BCHEP06276 602 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 HNRNPCP07910 306 aaKnown RBP eCLIP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZCCHC18P0CG32 403 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 TMIGD3P0DMS9 266 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 UBL4AP11441 157 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 HPGDP15428 266 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF17P17021 662 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 NCF2P19878 526 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 LCN1P31025 176 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 UQCRC1P31930 480 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 RYKP34925 604 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 PTGER4P35408 488 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ACAA2P42765 397 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 CRATP43155 626 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 KHKP50053 298 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ASCL1P50553 236 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 CCR4P51679 360 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF41P51814 821 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SIRPAP78324 504 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 KCNJ10P78508 379 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 HOXC5Q00444 222 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 TLE4Q04727 773 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 FAM27E3Q08E93 113 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 QPRTQ15274 297 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 RGNQ15493 299 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 HSPB2Q16082 182 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 BCL2A1Q16548 175 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SLC25A35Q3KQZ1 300 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM176BQ3YBM2 270 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 GLYR1Q49A26 553 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 GLIPR1L2Q4G1C9 344 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 GPAT3Q53EU6 434 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 HSP90B2PQ58FF3 399 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SLC25A53Q5H9E4 307 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 C6orf10Q5SRN2 563 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 LRIF1Q5T3J3 769 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 MRPL2Q5T653 305 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 AAGABQ6PD74 315 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms