RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 BTN3A2P78410 334 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 PLAURQ03405 335 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 SSBP1Q04837 148 aaKnown RBP6.69□□□□□ -1.34
USP48-206ENST00000464577 ELAVL3Q14576 367 aaKnown RBP6.69□□□□□ -1.34
USP48-206ENST00000464577 IRF4Q15306 451 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 ISXQ2M1V0 245 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 Q499Y3 187 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 ZNF684Q5T5D7 378 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 DCAF12L2Q5VW00 463 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 UQCC3Q6UW78 93 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 STAC2Q6ZMT1 411 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 C17orf107Q6ZR85 190 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 USP53Q70EK8 1073 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 MOB3CQ70IA8 216 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 ANKRD33Q7Z3H0 272 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 MUC20Q8N307 709 aaPredicted RBP6.69□□□□□ -1.34
USP48-206ENST00000464577 CDRT4Q8N9R6 151 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 SDR9C7Q8NEX9 313 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 OR4K14Q8NGD5 310 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 OR4C16Q8NGL9 310 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 OR4K13Q8NH42 304 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 NT5CQ8TCD5 201 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 ST8SIA2Q92186 375 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 EDAQ92838 391 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 RAB7BQ96AH8 199 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 TIMM29Q9BSF4 260 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 NMNAT2Q9BZQ4 307 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 NKX6-2Q9C056 277 aaPredicted RBP6.69□□□□□ -1.34
USP48-206ENST00000464577 APMAPQ9HDC9 416 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 HCFC1R1Q9NWW0 138 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 C2orf42Q9NWW7 574 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 ATPIF1Q9UII2 106 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 GMEB2Q9UKD1 530 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 ENTPD2Q9Y5L3 495 aa6.69□□□□□ -1.34
USP48-206ENST00000464577 A0A087WV62 115 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 TMEM272A0A1B0GTI8 110 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 A0A1B0GWA3 101 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 FAM74A7A6NL05 159 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 PEX12O00623 359 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 KDM4BO94953 1096 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 ZFPL1O95159 310 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 IGF2P01344 180 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 ADH1AP07327 375 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 CPMP14384 443 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 CSRP1P21291 193 aaKnown RBP6.68□□□□□ -1.34
USP48-206ENST00000464577 MST1P26927 711 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 ITPKBP27987 946 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 PEBP1P30086 187 aaKnown RBP6.68□□□□□ -1.34
USP48-206ENST00000464577 CSF2RBP32927 897 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 CBX5P45973 191 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 CLDN12P56749 244 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 RPS15P62841 145 aaKnown RBP6.68□□□□□ -1.34
USP48-206ENST00000464577 S100A12P80511 92 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 SRSF4Q08170 494 aaKnown RBP6.68□□□□□ -1.34
USP48-206ENST00000464577 ZNF345Q14585 488 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 DHCR24Q15392 516 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 PCGF3Q3KNV8 242 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 FAM74A3Q4VXF1 159 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 FNDC3BQ53EP0 1204 aaKnown RBP6.68□□□□□ -1.34
USP48-206ENST00000464577 CCDC157Q569K6 752 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 STPG1Q5TH74 334 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 DEFB128Q7Z7B8 93 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 LRRTM1Q86UE6 522 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 PAQR7Q86WK9 346 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 ZNF227Q86WZ6 799 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 CCDC36Q8IYA8 594 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 COX18Q8N8Q8 333 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 OR52E1Q8NGJ3 308 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 OR10K1Q8NGX5 313 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 TNFAIP8L1Q8WVP5 186 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 PHYHIPLQ96FC7 376 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 HSPA12BQ96MM6 686 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 LGR4Q9BXB1 951 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 TEX101Q9BY14 249 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 HDAC8Q9BY41 377 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 TRIM2Q9C040 744 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 SYNPO2LQ9H987 977 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 TCF7L1Q9HCS4 588 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 MYOZ1Q9NP98 299 aaPredicted RBP6.68□□□□□ -1.34
USP48-206ENST00000464577 PLA2G2EQ9NZK7 142 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 FLRT3Q9NZU0 649 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 USP36Q9P275 1121 aaKnown RBP6.68□□□□□ -1.34
USP48-206ENST00000464577 HEATR5BQ9P2D3 2071 aa6.68□□□□□ -1.34
USP48-206ENST00000464577 TRBV5-7A0A0A0MS05 114 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 TRAV14DV4A0A0A6YYC5 116 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ZNF98A6NK75 572 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 TEX46H3BTG2 121 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ARPC3O15145 178 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 BRINP1O60477 761 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ZNF254O75437 659 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ZNF432O94892 652 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 SPDEFO95238 335 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 PMS2P2O95744 297 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 CBX7O95931 251 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 PLATP00750 562 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 CD8AP01732 235 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 RLN1P04808 185 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 GUSBP08236 651 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 TACSTD2P09758 323 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 AKAIN1P0CW23 69 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms