RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ASB15Q8WXK1 588 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 LRFN5Q96NI6 719 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 VDAC3Q9Y277 283 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 PTRH2Q9Y3E5 179 aaKnown RBP11.6□□□□□ -0.55
VAPB-203ENST00000463370 B3GALT1Q9Y5Z6 326 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 PCNX3Q9H6A9 2034 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 PSMD9O00233 223 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 TAF4O00268 1085 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 IDH3BO43837 385 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 SLC25A12O75746 678 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 ZFAND5O76080 213 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 GPANK1O95872 356 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 HLA-DPB1P04440 258 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 ACP1P24666 158 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 ACVR1BP36896 505 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 PTGDSP41222 190 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 BDH1Q02338 343 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 SLC3A1Q07837 685 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 BTBD16Q32M84 506 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 OTPQ5XKR4 325 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 PLEKHG7Q6ZR37 379 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 JAZF1Q86VZ6 243 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 BPHLQ86WA6 291 aaPredicted RBP11.6□□□□□ -0.55
VAPB-203ENST00000463370 SLC35F2Q8IXU6 374 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 OR8K3Q8NH51 312 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 SDHCQ99643 169 aaPredicted RBP11.6□□□□□ -0.55
VAPB-203ENST00000463370 WDR54Q9H977 334 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 DAPK2Q9UIK4 370 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 R4GN57 208 aa11.6□□□□□ -0.55
VAPB-203ENST00000463370 MPDZO75970 2070 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 HTR3EA5X5Y0 456 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 UPK1BO75841 260 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 KLK3P07288 261 aaPredicted RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 PRKCAP17252 672 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 POU4F2Q12837 409 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 KRR1Q13601 381 aaKnown RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 OXA1LQ15070 435 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ZMAT1Q5H9K5 638 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 C1orf140Q5VVS0 124 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ZNF517Q6ZMY9 492 aaPredicted RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 NR2C2APQ86WQ0 139 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 OR5L2Q8NGL0 311 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 OR13C5Q8NGS8 318 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 NEIL3Q8TAT5 605 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ELP5Q8TE02 316 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 RNF138Q8WVD3 245 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 TMCO6Q96DC7 493 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 PGLYRP3Q96LB9 341 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 RASL10BQ96S79 203 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ALG12Q9BV10 488 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 MIXL1Q9H2W2 232 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 SRA1Q9HD15 236 aaKnown RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 SLC39A1Q9NY26 324 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 KLRF1Q9NZS2 232 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 GRHPRQ9UBQ7 328 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 C19orf25Q9UFG5 118 aaPredicted RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 ASPMQ8IZT6 3477 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 CASKO14936 926 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 TXNDC12O95881 172 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 HIST1H2ABP04908 130 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 OCM2P0CE71 109 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 OCMP0CE72 109 aaPredicted RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 APEHP13798 732 aaKnown RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 TCEA1P23193 301 aaKnown RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 ETV6P41212 452 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ACTC1P68032 377 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ACTA1P68133 377 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 PSPHP78330 225 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 FOXK1P85037 733 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 C17orf67Q0P5P2 114 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ZNF528Q3MIS6 628 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 STEAP3Q658P3 488 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 SLC6A19Q695T7 634 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 HIST3H2AQ7L7L0 130 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 NUP54Q7Z3B4 507 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 LYSMD2Q8IV50 215 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 OR6V1Q8N148 313 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 KDM8Q8N371 416 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 POMGNT2Q8NAT1 580 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 HIST1H2ACQ93077 130 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 PELI1Q96FA3 418 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ARL5BQ96KC2 179 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 MED18Q9BUE0 208 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 MROQ9BYG7 248 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 SIAEQ9HAT2 523 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ABCB9Q9NP78 766 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 ACOXLQ9NUZ1 547 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 GPN3Q9UHW5 284 aaPredicted RBP11.59□□□□□ -0.55
VAPB-203ENST00000463370 ST6GALNAC2Q9UJ37 374 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 GSTK1Q9Y2Q3 226 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 HS3ST3B1Q9Y662 390 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 V9GYH0 126 aa11.59□□□□□ -0.55
VAPB-203ENST00000463370 LOC102723996A0A087X1L8 192 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 IGHV1-45A0A0A0MS14 117 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 IQCMA0A1B0GVH7 501 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 ANKUB1A6NFN9 424 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 A8MVM7 634 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms