RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 MPDZO75970 2070 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 TMED7-TICAM2A0A0A6YYA0 188 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 C2orf72A6NCS6 295 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 WISP1O95388 367 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 CRYBB2P43320 205 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 RPS5P46782 204 aaKnown RBP13.14□□□□□ -0.31
HDAC6-213ENST00000462730 NKX2-5P52952 324 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-213ENST00000462730 ARPC4P59998 168 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 BTBD16Q32M84 506 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 GLRX5Q86SX6 157 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 ACBD7Q8N6N7 88 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 OR10H4Q8NGA5 316 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 OR52N1Q8NH53 320 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 SPRYD4Q8WW59 207 aaPredicted RBP13.14□□□□□ -0.31
HDAC6-213ENST00000462730 RASD2Q96D21 266 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 OR2B2Q9GZK3 357 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 GALNT9Q9HCQ5 603 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 MYOTQ9UBF9 498 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 TMED7Q9Y3B3 224 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 SDK2Q58EX2 2172 aa13.14□□□□□ -0.31
HDAC6-213ENST00000462730 TRAV36DV7A0A075B6V5 113 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 ARPC3O15145 178 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 SUSD5O60279 629 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 SLC25A12O75746 678 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 OR2J2O76002 312 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 BGLAPP02818 100 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 ASAH2BP0C7U1 165 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 NAGAP17050 411 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 TCN2P20062 427 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 RCVRNP35243 200 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 NBL1P41271 181 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 NR4A2P43354 598 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 RPS18P62269 152 aaKnown RBP13.13□□□□□ -0.31
HDAC6-213ENST00000462730 TPBGQ13641 420 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 OR5M10Q6IEU7 315 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF322Q6U7Q0 402 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-213ENST00000462730 GDPGP1Q6ZNW5 385 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 NUP54Q7Z3B4 507 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 CCDC190Q86UF4 302 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 GHDCQ8N2G8 530 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 ZFP41Q8N8Y5 198 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 CT55Q8WUE5 264 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 DNAJA3Q96EY1 480 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 TRMT61AQ96FX7 289 aaKnown RBP13.13□□□□□ -0.31
HDAC6-213ENST00000462730 ALG8Q9BVK2 526 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 NUAK2Q9H093 628 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF700Q9H0M5 742 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 ADGRL4Q9HBW9 690 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 SSR3Q9UNL2 185 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 SLC6A5Q9Y345 797 aa13.13□□□□□ -0.31
HDAC6-213ENST00000462730 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 DAPL1A0PJW8 107 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 TMEM72A0PK05 275 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 ANKUB1A6NFN9 424 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 LOC110117498-PIK3R3F6TDL0 507 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 IDH3BO43837 385 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 SERPINI2O75830 405 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 LALBAP00709 142 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 APOA1P02647 267 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 HIST1H2ABP04908 130 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 CELA2AP08217 269 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 UQCRC1P31930 480 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 CTXN1P60606 82 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 RPS25P62851 125 aaKnown RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 ALG10Q5BKT4 473 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 TMEM164Q5U3C3 297 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 BICRALQ6AI39 1079 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 LYPD8Q6UX82 237 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 HIST3H2AQ7L7L0 130 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 GRINAQ7Z429 371 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 LRRC75AQ8NAA5 344 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 ELP5Q8TE02 316 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 TTC9Q92623 222 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 HIST1H2ACQ93077 130 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF486Q96H40 463 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 NMNAT3Q96T66 252 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 SDHCQ99643 169 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 SPRY4Q9C004 299 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 NDEL1Q9GZM8 345 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 FKRPQ9H9S5 495 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 KLRF1Q9NZS2 232 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 TCFL5Q9UL49 500 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 YARS2Q9Y2Z4 477 aaKnown RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 EP300Q09472 2414 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 CD14P08571 375 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 SBK2P0C263 348 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 IFITM2Q01629 132 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 RPL18Q07020 188 aaKnown RBP13.12□□□□□ -0.31
HDAC6-213ENST00000462730 C17orf67Q0P5P2 114 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 LCN1P1Q5VSP4 162 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 C1QL3Q5VWW1 255 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 TMPRSS11AQ6ZMR5 421 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 CELF2-AS1Q8N7Q2 184 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 NPEPL1Q8NDH3 523 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 IL17RDQ8NFM7 739 aa13.12□□□□□ -0.31
HDAC6-213ENST00000462730 OR11G2Q8NGC1 345 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms