RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DNPH1O43598 174 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 KRT34O76011 436 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 PRKD3O94806 890 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 F12P00748 615 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 IFNA2P01563 188 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 OPN1SWP03999 348 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 YES1P07947 543 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM157CP0CG43 387 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 TFPIP10646 304 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 COX4I1P13073 169 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 IGHV1-2P23083 117 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 NTF4P34130 210 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CLK1P49759 484 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 P2RY4P51582 365 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 GNGT1P63211 74 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CSNK2A1P68400 391 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 H3F3AP84243 136 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 EGR4Q05215 589 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 BNIP2Q12982 314 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CYLC2Q14093 348 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 PPA1Q15181 289 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 STK11Q15831 433 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 DUSP7Q16829 419 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 VMACQ2NL98 169 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM249Q2WGJ8 235 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 KRTAP24-1Q3LI83 254 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CCDC80Q76M96 950 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 MTDHQ86UE4 582 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 KRT73Q86Y46 540 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC43A2Q8N370 569 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CADM2Q8N3J6 435 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 LSMEM1Q8N8F7 131 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 SMYD1Q8NB12 490 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM158Q8WZ71 300 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 HS6ST2Q96MM7 605 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF583Q96ND8 569 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 ARHGDIGQ99819 225 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 PTDSS2Q9BVG9 487 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM107BQ9H098 131 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 PIF1Q9H611 641 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 BARX1Q9HBU1 254 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 NGBQ9NPG2 151 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 TIGARQ9NQ88 270 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CMTM6Q9NX76 183 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CISD1Q9NZ45 108 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM181Q9P2C4 612 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 TESQ9UGI8 421 aaKnown RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 PRDM4Q9UKN5 801 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF232Q9UNY5 417 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 TRAPPC4Q9Y296 219 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 A0A0B4J2E0 115 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 A0A1B0GX12 115 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 LIPT2A6NK58 231 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ELOA3DA6NLF2 546 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 CCT8L1PA6NM43 557 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF724A8MTY0 619 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM220BPB1ANY3 271 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 FTCDNL1E5RQL4 147 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 E7EQL1 145 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 M0QX08 132 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 SSX4O60224 188 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 LYPD3O95274 346 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 LGI1O95970 557 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 NPPAP01160 153 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 THY1P04216 161 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 UQCRBP14927 111 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 FKBP2P26885 142 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC16A1P53985 500 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 RGS8P57771 180 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR2B6P58173 313 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 VLDLRP98155 873 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 RASGEF1BQ0VAM2 473 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 PDK3Q15120 406 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ELOA3BQ3SY89 546 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 MMEL1Q495T6 779 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 TIMM23BQ5SRD1 257 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 RBM45Q8IUH3 476 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ARMC8Q8IUR7 673 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 CCDC103Q8IW40 242 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC30A8Q8IWU4 369 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF433Q8N7K0 673 aaPredicted RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ELOA3Q8NG57 546 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR6T1Q8NGN1 323 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 RP9Q8TA86 221 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 STK35Q8TDR2 534 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 HTRA1Q92743 480 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 DDIT4LQ96D03 193 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 REXO5Q96IC2 774 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF607Q96SK3 696 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 SPATA5L1Q9BVQ7 753 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 CACNG6Q9BXT2 260 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 ALG2Q9H553 416 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 C12orf10Q9HB07 376 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 CACYBPQ9HB71 228 aaKnown RBP6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAIMQ9NVQ4 179 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM160Q9NX00 188 aa6.95□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM53CQ9NYF3 392 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms