RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ADIPOQQ15848 244 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 C5orf46Q6UWT4 87 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 SERPINA11Q86U17 422 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 EPHX4Q8IUS5 362 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 CLIP4Q8N3C7 705 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 FAM169BQ8N8A8 192 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 SLC35B4Q969S0 331 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 ANKRD27Q96NW4 1050 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
SKA3-204ENST00000462482 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.39□□□□□ -0.27
SKA3-204ENST00000462482 V9GYY5 206 aaPredicted RBP13.39□□□□□ -0.27
SKA3-204ENST00000462482 NR5A2O00482 541 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 AIM2O14862 343 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 UPK3AO75631 287 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 TGFAP01135 160 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 CECR9P0C854 216 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 PNMTP11086 282 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 CBR1P16152 277 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 ZNF23P17027 643 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 NPR2P20594 1047 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 IGFBP5P24593 272 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 ARR3P36575 388 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 RPS5P46782 204 aaKnown RBP13.38□□□□□ -0.27
SKA3-204ENST00000462482 CAPZA2P47755 286 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 P2RY4P51582 365 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 TUBA1BP68363 451 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 TUBA4AP68366 448 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 ARF1P84077 181 aaKnown RBP13.38□□□□□ -0.27
SKA3-204ENST00000462482 LGALS3BPQ08380 585 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 SQLEQ14534 574 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 MAPK11Q15759 364 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 RPS26P11Q5JNZ5 115 aaPredicted RBP13.38□□□□□ -0.27
SKA3-204ENST00000462482 FAM120AOSQ5T036 256 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 LIPNQ5VXI9 398 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 TUBA1AQ71U36 451 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 ARIH2OSQ8N7S6 290 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 PIK3C3Q8NEB9 887 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 NUP37Q8NFH4 326 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 IL17RDQ8NFM7 739 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 BBS10Q8TAM1 723 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 MGARPQ8TDB4 240 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 NEU4Q8WWR8 484 aaPredicted RBP13.38□□□□□ -0.27
SKA3-204ENST00000462482 SLC38A4Q969I6 547 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 MSI2Q96DH6 328 aaKnown RBP13.38□□□□□ -0.27
SKA3-204ENST00000462482 OXGR1Q96P68 337 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 PRR14Q9BWN1 585 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 PARD6BQ9BYG5 372 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 PLK3Q9H4B4 646 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 DYNLRB1Q9NP97 96 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 NKIRAS1Q9NYS0 192 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 CRNNQ9UBG3 495 aaPredicted RBP13.38□□□□□ -0.27
SKA3-204ENST00000462482 PCDHB14Q9Y5E9 798 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 MXRA5Q9NR99 2828 aa13.38□□□□□ -0.27
SKA3-204ENST00000462482 TMEM229AB2RXF0 380 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 hCG_2039718K7EN88 272 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 UBDO15205 165 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 NPIPB7O75200 414 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 POLR2JP52435 117 aaKnown RBP13.37□□□□□ -0.27
SKA3-204ENST00000462482 MVDP53602 400 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 FADDQ13158 208 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 SPATA21Q7Z572 469 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 NET1Q7Z628 596 aaPredicted RBP13.37□□□□□ -0.27
SKA3-204ENST00000462482 MIER2Q8N344 545 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 KDM8Q8N371 416 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 BPESC1Q9GZL8 116 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 ZNF442Q9H7R0 627 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 BCL2L10Q9HD36 194 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 SLC6A13Q9NSD5 602 aa13.37□□□□□ -0.27
SKA3-204ENST00000462482 ANK3Q12955 4377 aaKnown RBP13.36□□□□□ -0.27
SKA3-204ENST00000462482 IGHV4-61A0A0C4DH41 118 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 TMEM120BA0PK00 339 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 FTCDNL1E5RQL4 147 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 RPL36A-HNRNPH2H7BZ11 118 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 HAX1O00165 279 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 SNNO75324 88 aaPredicted RBP13.36□□□□□ -0.27
SKA3-204ENST00000462482 IGKV3-15P01624 115 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 IGLV1-44P01699 117 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 DAOP14920 347 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 CHN2P52757 468 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 STX1BP61266 288 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 NCALDP61601 193 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 NPRL3Q12980 569 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 MFSD13AQ14CX5 517 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 RGNQ15493 299 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 KRTAP24-1Q3LI83 254 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 GTDC1Q4AE62 458 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 FAM69AQ5T7M9 428 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 UGT2A3Q6UWM9 527 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 IL17RELQ6ZVW7 336 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 H1FNTQ75WM6 255 aaPredicted RBP13.36□□□□□ -0.27
SKA3-204ENST00000462482 LINGO2Q7L985 606 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 LSRQ86X29 649 aaPredicted RBP13.36□□□□□ -0.27
SKA3-204ENST00000462482 SNX32Q86XE0 403 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 KRT73Q86Y46 540 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 RNF217Q8TC41 542 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 DNAJA4Q8WW22 397 aaPredicted RBP13.36□□□□□ -0.27
SKA3-204ENST00000462482 ZBTB9Q96C00 473 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms