RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 OR5L2Q8NGL0 311 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 DAZLQ92904 295 aaKnown RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 SLAMF9Q96A28 289 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 ART5Q96L15 291 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 C17orf77Q96MU5 243 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 ZNF582Q96NG8 517 aaPredicted RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 SEPHS2Q99611 448 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 CHP1Q99653 195 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 KIFC1Q9BW19 673 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 NOL11Q9H8H0 719 aaKnown RBP4.18□□□□□ -1.74
COPS3-204ENST00000462236 LRTM1Q9HBL6 345 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 CHRAC1Q9NRG0 131 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 PRTFDC1Q9NRG1 225 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 KLHL28Q9NXS3 571 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 HAO2Q9NYQ3 351 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 ZNF226Q9NYT6 803 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 NPAP1Q9NZP6 1156 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 ANAPC5Q9UJX4 755 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 PDE10AQ9Y233 779 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 SLC6A5Q9Y345 797 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 DHRS7Q9Y394 339 aa4.18□□□□□ -1.74
COPS3-204ENST00000462236 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.18□□□□□ -1.74
COPS3-204ENST00000462236 TEX13DA0A0J9YY54 714 aaPredicted RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 PRSS51A0A1B0GVH4 220 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 FAM172BPA6NC97 362 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 URADA6NGE7 173 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 PSMD12O00232 456 aaPredicted RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 XRCC3O43542 346 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 OR1F1O43749 312 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 ZBTB14O43829 449 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 ACSL3O95573 720 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 ACTL6AO96019 429 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CLPSP04118 112 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 SOD3P08294 240 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 GDF1P27539 372 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 PTPN6P29350 595 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 ACVR1BP36896 505 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 FDFT1P37268 417 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 RPL21P46778 160 aaKnown RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 CCR8P51685 355 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 DVL1P1P54792 670 aaPredicted RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 DIO3P55073 304 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CDH13P55290 713 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 RAB8AP61006 207 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 KCNJ2P63252 427 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CCZ1BP86790 482 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CCZ1P86791 482 aaPredicted RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 RGS1Q08116 209 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 LOXL1Q08397 574 aaPredicted RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 PNRC1Q12796 327 aaPredicted RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 ASPHQ12797 758 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CUL1Q13616 776 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 BEX5Q5H9J7 111 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 ARMC4Q5T2S8 1044 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 BHLHB9Q6PI77 547 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 AGTRAPQ6RW13 159 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 SASS6Q6UVJ0 657 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 KIAA1328Q86T90 577 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 FAM83FQ8NEG4 500 aaPredicted RBP4.17□□□□□ -1.74
COPS3-204ENST00000462236 TRPV3Q8NET8 790 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 DMBX1Q8NFW5 382 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 OR10G3Q8NGC4 313 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 OR13A1Q8NGR1 328 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 SLC22A8Q8TCC7 542 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CD200R1Q8TD46 325 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 NEIL2Q969S2 332 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 MS4A6EQ96DS6 147 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 ZNF597Q96LX8 424 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 TNFRSF13CQ96RJ3 184 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CENPOQ9BU64 300 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 MED18Q9BUE0 208 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 OR10A4Q9H209 315 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 RHCGQ9UBD6 479 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 C15orf41Q9Y2V0 281 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 CLCA3PQ9Y6N3 262 aa4.17□□□□□ -1.74
COPS3-204ENST00000462236 IGHV4-30-2A0A087WSY4 118 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 LRIT2A6NDA9 550 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 C17orf105B2RV13 164 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 BMPR1BO00238 502 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 LRATO95237 230 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 VAPBO95292 243 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 TGM6O95932 706 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 CD8AP01732 235 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 ZNF708P17019 499 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 ANOS1P23352 680 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 IGFBP5P24593 272 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 PTGDSP41222 190 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 CASP3P42574 277 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 LHX2P50458 406 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 RAD23AP54725 363 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 LIM2P55344 173 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 CLDN18P56856 261 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 RPS4XP62701 263 aaKnown RBP4.16□□□□□ -1.74
COPS3-204ENST00000462236 CRADDP78560 199 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 RCAN2Q14206 197 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 EBPQ15125 230 aaKnown RBP4.16□□□□□ -1.74
COPS3-204ENST00000462236 PHKG1Q16816 387 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 ZNF718Q3SXZ3 478 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 FAM174BQ3ZCQ3 159 aa4.16□□□□□ -1.74
COPS3-204ENST00000462236 ZNF628Q5EBL2 1059 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms