RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 FKRPQ9H9S5 495 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 OBP2BQ9NPH6 170 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 B3GAT1Q9P2W7 334 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 SEC14L4Q9UDX3 406 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 TESQ9UGI8 421 aaKnown RBP16.57■□□□□ 0.24
VARS-220ENST00000461874 TRAV36DV7A0A075B6V5 113 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 UPK3AO75631 287 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 H2AFXP16104 143 aaPredicted RBP16.56■□□□□ 0.24
VARS-220ENST00000461874 ZNF43P17038 809 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 PCSK6P29122 969 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 FABP6P51161 128 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 CLDN17P56750 224 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 NRF1Q16656 503 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 TBRG1Q3YBR2 411 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 FAM91A1Q658Y4 838 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 ZNF544Q6NX49 715 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 NET1Q7Z628 596 aaPredicted RBP16.56■□□□□ 0.24
VARS-220ENST00000461874 DHDDSQ86SQ9 333 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 ARMC8Q8IUR7 673 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 OR1K1Q8NGR3 316 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 SLC47A1Q96FL8 570 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 ADAD1Q96M93 576 aaKnown RBP16.56■□□□□ 0.24
VARS-220ENST00000461874 ALKBH3Q96Q83 286 aaPredicted RBP16.56■□□□□ 0.24
VARS-220ENST00000461874 WFDC6Q9BQY6 131 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 CACNG6Q9BXT2 260 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 LINC00470Q9BZP3 86 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 ARGLU1Q9NWB6 273 aaPredicted RBP16.56■□□□□ 0.24
VARS-220ENST00000461874 TRIM33Q9UPN9 1127 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 RCE1Q9Y256 329 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 ANGPT4Q9Y264 503 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 NDUFAF1Q9Y375 327 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 ATP23Q9Y6H3 246 aa16.56■□□□□ 0.24
VARS-220ENST00000461874 M0R082 166 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 AIM2O14862 343 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 TPST2O60704 377 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 EDF1O60869 148 aaKnown RBP16.55■□□□□ 0.24
VARS-220ENST00000461874 ZNF432O94892 652 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 MFN2O95140 757 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 GRPRP30550 384 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 RGS8P57771 180 aaPredicted RBP16.55■□□□□ 0.24
VARS-220ENST00000461874 NCALDP61601 193 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 KRTAP1-1Q07627 177 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 DMTNQ08495 405 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 H1FNTQ75WM6 255 aaPredicted RBP16.55■□□□□ 0.24
VARS-220ENST00000461874 RETREG3Q86VR2 466 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 PTOV1Q86YD1 416 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 C11orf65Q8NCR3 313 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 MAPK1IP1LQ8NDC0 245 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 ZNF417Q8TAU3 575 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 BCL2L2Q92843 193 aaPredicted RBP16.55■□□□□ 0.24
VARS-220ENST00000461874 ANKRD27Q96NW4 1050 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 ZNF587Q96SQ5 575 aaPredicted RBP16.55■□□□□ 0.24
VARS-220ENST00000461874 CGREF1Q99674 301 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 EVA1AQ9H8M9 152 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 TMEM27Q9HBJ8 222 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 NPHS2Q9NP85 383 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 KLHL14Q9P2G3 628 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 SLC13A4Q9UKG4 626 aa16.55■□□□□ 0.24
VARS-220ENST00000461874 HEATR1Q9H583 2144 aaKnown RBP16.55■□□□□ 0.24
VARS-220ENST00000461874 SONP18583 2426 aaKnown RBP16.55■□□□□ 0.24
VARS-220ENST00000461874 A0A087WUJ7 227 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 A0A0B4J2E0 115 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 LOC102725191A0A1B0GVB3 256 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 A0A1B0GX12 115 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 INAFM1C9JVW0 142 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 ANGPT2O15123 496 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 PAX7P23759 505 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 PCBP3P57721 371 aaKnown RBP16.54■□□□□ 0.24
VARS-220ENST00000461874 RBBP4Q09028 425 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 C1DQ13901 141 aaKnown RBP16.54■□□□□ 0.24
VARS-220ENST00000461874 OR1Q1Q15612 314 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 HMBOX1Q6NT76 420 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 ANKK1Q8NFD2 765 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 OR6S1Q8NH40 331 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 MAGEE2Q8TD90 523 aaPredicted RBP16.54■□□□□ 0.24
VARS-220ENST00000461874 TSPEARQ8WU66 669 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 ZNF317Q96PQ6 595 aaPredicted RBP16.54■□□□□ 0.24
VARS-220ENST00000461874 SIKE1Q9BRV8 207 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 SELENONQ9NZV5 590 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 ABCA1O95477 2261 aa16.54■□□□□ 0.24
VARS-220ENST00000461874 ARPC4-TTLL3A0A0A6YYG9 625 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 ATP6V1G2-DDX39BF2Z307 99 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 RPL36A-HNRNPH2H7BZ11 118 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 SSX4O60224 188 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 APOBEC3AP31941 199 aaPredicted RBP16.53■□□□□ 0.24
VARS-220ENST00000461874 SH3BGRP55822 239 aaPredicted RBP16.53■□□□□ 0.24
VARS-220ENST00000461874 MTPNP58546 118 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 UBE2NP61088 152 aaKnown RBP16.53■□□□□ 0.24
VARS-220ENST00000461874 PPP2R2BQ00005 443 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 ROR2Q01974 943 aaKnown RBP16.53■□□□□ 0.24
VARS-220ENST00000461874 SELPLGQ14242 412 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 MFSD13AQ14CX5 517 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 CYP51A1Q16850 503 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 ANKRD16Q6P6B7 361 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 SMYD1Q8NB12 490 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 ADPRHL1Q8NDY3 354 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 RNF217Q8TC41 542 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 SLC41A3Q96GZ6 507 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 SLC38A2Q96QD8 506 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 EPYCQ99645 322 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms