RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 RIDAP52758 137 aaKnown RBP13.31□□□□□ -0.28
NCL-207ENST00000461347 S100A10P60903 97 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 EIF2B5Q13144 721 aaKnown RBP13.31□□□□□ -0.28
NCL-207ENST00000461347 MLC1Q15049 377 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 Q499Y3 187 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 RNLSQ5VYX0 342 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 SLC6A19Q695T7 634 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 OR5M10Q6IEU7 315 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 MYADMQ96S97 322 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 FAM83CQ9BQN1 747 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 MRI1Q9BV20 369 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 TBC1D29Q9UFV1 150 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 ATP6V1G2-DDX39BF2Z307 99 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 THBS1P07996 1170 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 POU3F3P20264 500 aaPredicted RBP13.31□□□□□ -0.28
NCL-207ENST00000461347 MAGEB1P43366 347 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 LIPNQ5VXI9 398 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 CD163Q86VB7 1156 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 C9orf62Q8N4C0 152 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 C12orf45Q8N5I9 185 aaPredicted RBP13.31□□□□□ -0.28
NCL-207ENST00000461347 OR4D9Q8NGE8 314 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 EPHA6Q9UF33 1036 aa13.31□□□□□ -0.28
NCL-207ENST00000461347 DCNP07585 359 aaKnown RBP13.3□□□□□ -0.28
NCL-207ENST00000461347 ZNF806P0C7X5 589 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 NTSR1P30989 418 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 OR7E24Q6IFN5 339 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 UBE3DQ7Z6J8 389 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 SMIM4Q8WVI0 70 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 ZC3HAV1LQ96H79 300 aaKnown RBP13.3□□□□□ -0.28
NCL-207ENST00000461347 INTS14Q96SY0 518 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 HDAC8Q9BY41 377 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 DUSP22Q9NRW4 184 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 ASF1BQ9NVP2 202 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 C19orf53Q9UNZ5 99 aaPredicted RBP13.3□□□□□ -0.28
NCL-207ENST00000461347 PRAMEF27A3QJZ7 478 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 DOK2O60496 412 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 PRAMEF2O60811 474 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 PAPLNO95428 1278 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 TIMP1P01033 207 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 PPP3CBP16298 524 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 CDK2P24941 298 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 AANATQ16613 207 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 Q5BKY6 102 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 LEUTXA8MZ59 168 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 ZNF736B4DX44 427 aaPredicted RBP13.3□□□□□ -0.28
NCL-207ENST00000461347 TSFMP43897 325 aaKnown RBP13.3□□□□□ -0.28
NCL-207ENST00000461347 TNK1Q13470 666 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 FGL2Q14314 439 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 NLRC3Q7RTR2 1065 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 ERVMER34-1Q9H9K5 563 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 PCDHB16Q9NRJ7 776 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 TSC2P49815 1807 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 SCN2AQ99250 2005 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 TSPAN11A1L157 253 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 IFITM5A6NNB3 132 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 ZNF705EA8MWA4 302 aaPredicted RBP13.3□□□□□ -0.28
NCL-207ENST00000461347 NPIPA5E9PKD4 350 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 DYRK1AQ13627 763 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 GPNMBQ14956 572 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 OTPQ5XKR4 325 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 OR11H7Q8NGC8 314 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 SLC2A12Q8TD20 617 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 FAM46BQ96A09 425 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 TOX2Q96NM4 488 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 IL23AQ9NPF7 189 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 FBXO34Q9NWN3 711 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 ACAD8Q9UKU7 415 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 NPIPA1Q9UND3 350 aa13.3□□□□□ -0.28
NCL-207ENST00000461347 SPAG17Q6Q759 2223 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 KRBOX1C9JBD0 128 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 LSSP48449 732 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 MMP15P51511 669 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 CXADRP78310 365 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 ELOVL3Q9HB03 270 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 SIRT4Q9Y6E7 314 aaPredicted RBP13.29□□□□□ -0.28
NCL-207ENST00000461347 LGALS8O00214 317 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 CD53P19397 219 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 DLSTP36957 453 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 DUSP2Q05923 314 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 FGL1Q08830 312 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 CBFBQ13951 182 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 TANGO2Q6ICL3 276 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 SLC18B1Q6NT16 456 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 OVCH1Q7RTY7 1134 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 ZBTB44Q8NCP5 570 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 OR51S1Q8NGJ8 323 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 OR13C3Q8NGS6 347 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 YIPF5Q969M3 257 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 ADOQ96SZ5 270 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 ELF4Q99607 663 aaPredicted RBP13.29□□□□□ -0.28
NCL-207ENST00000461347 SIGLEC7Q9Y286 467 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 EXOGQ9Y2C4 368 aaKnown RBP13.29□□□□□ -0.28
NCL-207ENST00000461347 TMEM229AB2RXF0 380 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 PLPP2O43688 288 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 PRKNO60260 465 aaPredicted RBP13.29□□□□□ -0.28
NCL-207ENST00000461347 SDC3O75056 442 aa13.29□□□□□ -0.28
NCL-207ENST00000461347 PVALBP20472 110 aaPredicted RBP13.29□□□□□ -0.28
NCL-207ENST00000461347 MAT1AQ00266 395 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms