RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ZNF43P17038 809 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 CDK6Q00534 326 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 LGALS3BPQ08380 585 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 C3orf36Q3SXR2 165 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 FAM69AQ5T7M9 428 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 LINGO2Q7L985 606 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 ZNF525Q8N782 197 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 ANKK1Q8NFD2 765 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 DNAJA4Q8WW22 397 aaPredicted RBP19.87■□□□□ 0.77
PTPN4-207ENST00000460162 KCNS3Q9BQ31 491 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 VAPAQ9P0L0 249 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 SLAMF8Q9P0V8 285 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 TESQ9UGI8 421 aaKnown RBP19.87■□□□□ 0.77
PTPN4-207ENST00000460162 PMF1-BGLAPU3KQ54 211 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 ARFGEF3Q5TH69 2177 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 ALPK2Q86TB3 2170 aa19.87■□□□□ 0.77
PTPN4-207ENST00000460162 TRBV5-3A0A0A0MS03 114 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 A0A1B0GWA3 101 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 AIM2O14862 343 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 UPK3AO75631 287 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 HTR2AP28223 471 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 ATP4BP51164 291 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 EFNA4P52798 201 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 CLDN17P56750 224 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 NCALDP61601 193 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 ALG10BQ5I7T1 473 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 HMBOX1Q6NT76 420 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 ANKRD16Q6P6B7 361 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 C10orf111Q8N326 155 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 HTRA1Q92743 480 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 BCL2L2Q92843 193 aaPredicted RBP19.86■□□□□ 0.77
PTPN4-207ENST00000460162 OXGR1Q96P68 337 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 NELFAQ9H3P2 528 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 TMEM38AQ9H6F2 299 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 SLC52A3Q9NQ40 469 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 YAE1D1Q9NRH1 226 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 B3GAT1Q9P2W7 334 aa19.86■□□□□ 0.77
PTPN4-207ENST00000460162 CRNNQ9UBG3 495 aaPredicted RBP19.86■□□□□ 0.77
PTPN4-207ENST00000460162 PRORSD1PA6NEY8 169 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 RPL36A-HNRNPH2H7BZ11 118 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 AKAP8O43823 692 aaKnown RBP19.85■□□□□ 0.77
PTPN4-207ENST00000460162 ZNF432O94892 652 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 CRYAAP02489 173 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 AQP5P55064 265 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 ROR2Q01974 943 aaKnown RBP19.85■□□□□ 0.77
PTPN4-207ENST00000460162 LOXL1Q08397 574 aaPredicted RBP19.85■□□□□ 0.77
PTPN4-207ENST00000460162 PAGE3Q5JUK9 113 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 FAM91A1Q658Y4 838 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 COMTD1Q86VU5 262 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 KDM8Q8N371 416 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 ADPRHL1Q8NDY3 354 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 BHLHE22Q8NFJ8 381 aaPredicted RBP19.85■□□□□ 0.77
PTPN4-207ENST00000460162 FAM168AQ92567 244 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 ATP6V1G3Q96LB4 118 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 MDFIQ99750 246 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 RSPO3Q9BXY4 272 aaPredicted RBP19.85■□□□□ 0.77
PTPN4-207ENST00000460162 SEC14L4Q9UDX3 406 aa19.85■□□□□ 0.77
PTPN4-207ENST00000460162 TRAV36DV7A0A075B6V5 113 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 M0R082 166 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 SLC43A1O75387 559 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 PDE5AO76074 875 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 HOXB1P14653 301 aaPredicted RBP19.84■□□□□ 0.77
PTPN4-207ENST00000460162 GPX2P18283 190 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 SNRPD2P62316 118 aaKnown RBP19.84■□□□□ 0.77
PTPN4-207ENST00000460162 SCARB2Q14108 478 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 SQLEQ14534 574 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 SWI5Q1ZZU3 235 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 TMEM249Q2WGJ8 235 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 ULK3Q6PHR2 472 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 NET1Q7Z628 596 aaPredicted RBP19.84■□□□□ 0.77
PTPN4-207ENST00000460162 FAM169BQ8N8A8 192 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 ZNF417Q8TAU3 575 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 C10orf105Q8TEF2 133 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 TNFRSF13CQ96RJ3 184 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 ZNF587Q96SQ5 575 aaPredicted RBP19.84■□□□□ 0.77
PTPN4-207ENST00000460162 IKZF5Q9H5V7 419 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 KLHL14Q9P2G3 628 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 FKBP7Q9Y680 259 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 COL6A5A8TX70 2615 aa19.84■□□□□ 0.77
PTPN4-207ENST00000460162 IGKV1D-42A0A075B6H8 117 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 LOC102725191A0A1B0GVB3 256 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 A8MV72 311 aaPredicted RBP19.83■□□□□ 0.77
PTPN4-207ENST00000460162 EVPLLA8MZ36 301 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 IGLV1-44P01699 117 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 RGS8P57771 180 aaPredicted RBP19.83■□□□□ 0.77
PTPN4-207ENST00000460162 VLDLRP98155 873 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 C1DQ13901 141 aaKnown RBP19.83■□□□□ 0.77
PTPN4-207ENST00000460162 MFSD13AQ14CX5 517 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 C6orf52Q5T4I8 152 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 HIPK1Q86Z02 1210 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 OR6S1Q8NH40 331 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 DYDC1Q8WWB3 177 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 STON2Q8WXE9 905 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 TAAR8Q969N4 342 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 FBXO17Q96EF6 278 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 SLC47A1Q96FL8 570 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 ZNF607Q96SK3 696 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 EVA1AQ9H8M9 152 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 CA10Q9NS85 328 aa19.83■□□□□ 0.77
PTPN4-207ENST00000460162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms