RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 STARD4Q96DR4 205 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 PSD2Q9BQI7 771 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 OPN3Q9H1Y3 402 aaPredicted RBP13.9□□□□□ -0.18
SDF4-204ENST00000459994 SEMA6AQ9H2E6 1030 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 SLC24A3Q9HC58 644 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 FOXD3Q9UJU5 478 aaPredicted RBP13.9□□□□□ -0.18
SDF4-204ENST00000459994 PLEKHA6Q9Y2H5 1048 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 MED31Q9Y3C7 131 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 U3KQV3 271 aa13.9□□□□□ -0.18
SDF4-204ENST00000459994 RAI1Q7Z5J4 1906 aaPredicted RBP13.9□□□□□ -0.18
SDF4-204ENST00000459994 FREM1Q5H8C1 2179 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 PRR14LQ5THK1 2151 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 ARRDC5A6NEK1 342 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 SLC22A20A6NK97 555 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 GJE1A6NN92 205 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 A8MXE2 369 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 AQP8O94778 261 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 CCNB2O95067 398 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 EPXP11678 715 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 CCNA2P20248 432 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 UGT2B15P54855 530 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 CTBP2P56545 445 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 SIRPAP78324 504 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 FAM27E3Q08E93 113 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 FOXD4Q12950 439 aaPredicted RBP13.89□□□□□ -0.19
SDF4-204ENST00000459994 PPP1R8Q12972 351 aaKnown RBP13.89□□□□□ -0.19
SDF4-204ENST00000459994 DAZAP2Q15038 168 aaPredicted RBP13.89□□□□□ -0.19
SDF4-204ENST00000459994 PON3Q15166 354 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 SYT14P1Q58G82 188 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 ZNF474Q6S9Z5 364 aaPredicted RBP13.89□□□□□ -0.19
SDF4-204ENST00000459994 P4HA3Q7Z4N8 544 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 HIPK1Q86Z02 1210 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 OR4K5Q8NGD3 323 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 OR6S1Q8NH40 331 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 GIPC3Q8TF64 312 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 ZFP3Q96NJ6 502 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 OSBPL10Q9BXB5 764 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 KLHL4Q9C0H6 718 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 MEPEQ9NQ76 525 aaPredicted RBP13.89□□□□□ -0.19
SDF4-204ENST00000459994 ST6GALNAC2Q9UJ37 374 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 HDGFL3Q9Y3E1 203 aa13.89□□□□□ -0.19
SDF4-204ENST00000459994 TRAV36DV7A0A075B6V5 113 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 ZC3H12DA2A288 527 aaKnown RBP13.88□□□□□ -0.19
SDF4-204ENST00000459994 SIAH2O43255 324 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 OR2T1O43869 369 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
SDF4-204ENST00000459994 ATP6V1G2O95670 118 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 CGAP01215 116 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 SHC1P29353 583 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 CCKARP32238 428 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 IFNGR2P38484 337 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 SORDQ00796 357 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 PRKCDQ05655 676 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 SLC34A1Q06495 639 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 CTU2Q2VPK5 515 aaKnown RBP13.88□□□□□ -0.19
SDF4-204ENST00000459994 TMEM176BQ3YBM2 270 aaPredicted RBP13.88□□□□□ -0.19
SDF4-204ENST00000459994 C1orf140Q5VVS0 124 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 ZNF770Q6IQ21 691 aaPredicted RBP13.88□□□□□ -0.19
SDF4-204ENST00000459994 TBPL2Q6SJ96 375 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 C22orf34Q6ZV56 151 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 ZDHHC13Q8IUH4 622 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 NRMQ8IXM6 262 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 MEIOBQ8N635 442 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 CNEP1R1Q8N9A8 125 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 ATP6V1C2Q8NEY4 427 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 PIGXQ8TBF5 258 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 LRRC46Q96FV0 321 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 ADGRG7Q96K78 797 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 KLHL15Q96M94 604 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 OR11A1Q9GZK7 315 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 GABARAPL1Q9H0R8 117 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 KRCC1Q9NPI7 259 aaPredicted RBP13.88□□□□□ -0.19
SDF4-204ENST00000459994 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
SDF4-204ENST00000459994 TMEM5Q9Y2B1 443 aa13.88□□□□□ -0.19
SDF4-204ENST00000459994 G3V2T6 193 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 CASQ2O14958 399 aaPredicted RBP13.87□□□□□ -0.19
SDF4-204ENST00000459994 OR10H3O60404 316 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 FZD7O75084 574 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 AHSA1O95433 338 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 TFPIP10646 304 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 ZNF23P17027 643 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 LSM11P83369 360 aaKnown RBP eCLIP13.87□□□□□ -0.19
SDF4-204ENST00000459994 GUSBP1Q15486 140 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 C1orf94Q6P1W5 598 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 ESPNLQ6ZVH7 1005 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 KIF18BQ86Y91 864 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 P3H2Q8IVL5 708 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 CDK20Q8IZL9 346 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 ICA1LQ8NDH6 482 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 OR10G2Q8NGC3 310 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 MFSD8Q8NHS3 518 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 LIPHQ8WWY8 451 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 KTI12Q96EK9 354 aaPredicted RBP13.87□□□□□ -0.19
SDF4-204ENST00000459994 PTDSS2Q9BVG9 487 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 PIGMQ9H3S5 423 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 TMEM185BQ9H7F4 350 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 PLEKHF2Q9H8W4 249 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 RNF122Q9H9V4 155 aa13.87□□□□□ -0.19
SDF4-204ENST00000459994 PDP1Q9P0J1 537 aaPredicted RBP13.87□□□□□ -0.19
SDF4-204ENST00000459994 CLEC4AQ9UMR7 237 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms