RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TALDO1P37837 337 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 PNLIPRP2P54317 469 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 SF3A2Q15428 464 aaKnown RBP15.17■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF684Q5T5D7 378 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 RSBN1Q5VWQ0 802 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-202ENST00000457422 UNQ9370/PRO34162Q6UXP9 181 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 PRR23CQ6ZRP0 262 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 SCAIQ8N9R8 606 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 TP53INP1Q96A56 240 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 KTI12Q96EK9 354 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-202ENST00000457422 FRMD6Q96NE9 622 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 NUDT22Q9BRQ3 303 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 ACOXLQ9NUZ1 547 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF221Q9UK13 617 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 SDK1Q7Z5N4 2213 aa15.17■□□□□ 0.02
CCDC43-202ENST00000457422 ARID1BQ8NFD5 2236 aaPredicted RBP15.17■□□□□ 0.02
CCDC43-202ENST00000457422 TRBV2A0A0J9YWF9 115 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 ANKRD61A6NGH8 418 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 FAM171A2A8MVW0 826 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 LYRM1O43325 122 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 CDC40O60508 579 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCDC43-202ENST00000457422 EIF4EP06730 217 aaKnown RBP15.16■□□□□ 0.02
CCDC43-202ENST00000457422 DDOSTP39656 456 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 RPL18Q07020 188 aaKnown RBP15.16■□□□□ 0.02
CCDC43-202ENST00000457422 PLCXD2Q0VAA5 305 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 SLC29A4Q7RTT9 530 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 NANOGNBQ7Z5D8 188 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 SAMD12Q8N8I0 201 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 PLPP5Q8NEB5 264 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 RPRD1BQ9NQG5 326 aaKnown RBP15.16■□□□□ 0.02
CCDC43-202ENST00000457422 FGF21Q9NSA1 209 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 POU2F3Q9UKI9 436 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 MKL2Q9ULH7 1088 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 TRIOBPQ9H2D6 2365 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 A0A0G2JMP0 313 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 A0A0X1KG70 313 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 NOTOA8MTQ0 251 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 HCRTR2O43614 444 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 NDUFB5O43674 189 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 EDNRAP25101 427 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 QPRTQ15274 297 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 SHBQ15464 509 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 SLC25A35Q3KQZ1 300 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 SLC16A9Q7RTY1 509 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 MARCH3Q86UD3 253 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 UBE2J2Q8N2K1 259 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 OR4M2Q8NGB6 313 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 OR4M1Q8NGD0 313 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 TRMT10AQ8TBZ6 339 aaKnown RBP15.16■□□□□ 0.02
CCDC43-202ENST00000457422 TAAR8Q969N4 342 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 CCDC74AQ96AQ1 378 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 OMA1Q96E52 524 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 RXFP3Q9NSD7 469 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 CTSFQ9UBX1 484 aa15.16■□□□□ 0.02
CCDC43-202ENST00000457422 TOX3O15405 576 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-202ENST00000457422 F13BP05160 661 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 KRT8P05787 483 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 DCNP07585 359 aaKnown RBP15.15■□□□□ 0.02
CCDC43-202ENST00000457422 GRPRP30550 384 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 PSMB10P40306 273 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 CXCL12P48061 93 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 CEP78Q5JTW2 689 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 ATAD3CQ5T2N8 411 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 SLC6A19Q695T7 634 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 GPR139Q6DWJ6 353 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 PLET1Q6UQ28 207 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 LANCL3Q6ZV70 420 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 NCCRP1Q6ZVX7 275 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-202ENST00000457422 OVCH1Q7RTY7 1134 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 ST6GAL2Q96JF0 529 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 SMAD5Q99717 465 aaKnown RBP15.15■□□□□ 0.02
CCDC43-202ENST00000457422 TGIF2Q9GZN2 237 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 ABRACLQ9P1F3 81 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 ZNF346Q9UL40 294 aaKnown RBP15.15■□□□□ 0.02
CCDC43-202ENST00000457422 FLRT2O43155 660 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 CPNE3O75131 537 aaKnown RBP15.15■□□□□ 0.02
CCDC43-202ENST00000457422 BGLAPP02818 100 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 PGCP20142 388 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 ABCD3P28288 659 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 PITPNBP48739 271 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 FOXL2P58012 376 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 TOMM34Q15785 309 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-202ENST00000457422 MESTQ5EB52 335 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 KCTD20Q7Z5Y7 419 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 HAVCR2Q8TDQ0 301 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 TSPAN32Q96QS1 320 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 CTRCQ99895 268 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 TBL1XR1Q9BZK7 514 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 NEK6Q9HC98 313 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 GRHPRQ9UBQ7 328 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 SRPK3Q9UPE1 567 aa15.15■□□□□ 0.02
CCDC43-202ENST00000457422 TRAV36DV7A0A075B6V5 113 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 A0A0B4J293 547 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 A0A1W2PPK0 400 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 AGRPO00253 132 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 KHNYNO15037 678 aaKnown RBP15.14■□□□□ 0.01
CCDC43-202ENST00000457422 EPXP11678 715 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 CXCR1P25024 350 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 INPP1P49441 399 aa15.14■□□□□ 0.01
CCDC43-202ENST00000457422 RHBDD2Q6NTF9 364 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms