RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 PLSCR4Q9NRQ2 329 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SMCO4Q9NRQ5 59 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 GDF2Q9UK05 429 aaPredicted RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 EXO1Q9UQ84 846 aaKnown RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SERTM2A0A1B0GWG4 89 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 TMEM202A6NGA9 273 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 FAAHO00519 579 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 FFAR1O14842 300 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 FGF16O43320 207 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 SCGB1D2O95969 90 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 DGKGP49619 791 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 PSG6Q00889 435 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 MESTQ5EB52 335 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 OR2G6Q5TZ20 316 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 CNIH2Q6PI25 160 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 ZNF813Q6ZN06 617 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 SLC30A8Q8IWU4 369 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 C19orf47Q8N9M1 422 aaKnown RBP8.9□□□□□ -0.98
LINC01940-201ENST00000455228 OR2M7Q8NG81 312 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 OR13C8Q8NGS7 320 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 OR9A4Q8NGU2 314 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 C16orf78Q8WTQ4 265 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 UTP23Q9BRU9 249 aaKnown RBP8.9□□□□□ -0.98
LINC01940-201ENST00000455228 FUZQ9BT04 418 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 TMEM200CA6NKL6 621 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 STK25O00506 426 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 IGF2P01344 180 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 C1GALT1C1LP0DN25 315 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 ELAVL4P26378 380 aaKnown RBP8.9□□□□□ -0.98
LINC01940-201ENST00000455228 HSD11B1P28845 292 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 CD70P32970 193 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 RABIFP47224 123 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 PRRX1P54821 245 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 DLX5P56178 289 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 SMIM11AP58511 58 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 GAMTQ14353 236 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 SURF2Q15527 256 aaPredicted RBP8.9□□□□□ -0.98
LINC01940-201ENST00000455228 TXNDC8Q6A555 127 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 ZNF770Q6IQ21 691 aaPredicted RBP8.9□□□□□ -0.98
LINC01940-201ENST00000455228 FAM71CQ8NEG0 241 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 OR5T3Q8NGG3 340 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 CPT1CQ8TCG5 803 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 ACOT12Q8WYK0 555 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 RAB8BQ92930 207 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 ALKBH3Q96Q83 286 aaPredicted RBP8.9□□□□□ -0.98
LINC01940-201ENST00000455228 FZD3Q9NPG1 666 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 ISYNA1Q9NPH2 558 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 CBLCQ9ULV8 474 aa8.9□□□□□ -0.98
LINC01940-201ENST00000455228 COLQQ9Y215 455 aaPredicted RBP8.9□□□□□ -0.98
LINC01940-201ENST00000455228 EMC8O43402 210 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 IL18BPO95998 194 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 CKMP06732 381 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 C1SP09871 688 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 IMPA1P29218 277 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 CTSOP43234 321 aaPredicted RBP8.9□□□□□ -0.99
LINC01940-201ENST00000455228 MANFP55145 182 aaKnown RBP8.9□□□□□ -0.99
LINC01940-201ENST00000455228 PCBP3P57721 371 aaKnown RBP8.9□□□□□ -0.99
LINC01940-201ENST00000455228 RPS25P62851 125 aaKnown RBP8.9□□□□□ -0.99
LINC01940-201ENST00000455228 GINS1Q14691 196 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 ZNF468Q5VIY5 522 aaPredicted RBP8.9□□□□□ -0.99
LINC01940-201ENST00000455228 WDR53Q7Z5U6 358 aaPredicted RBP8.9□□□□□ -0.99
LINC01940-201ENST00000455228 ZFP41Q8N8Y5 198 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 OR52I1Q8NGK6 324 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 OR2G2Q8NGZ5 317 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 OIT3Q8WWZ8 545 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 CORO2AQ92828 525 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 ACTR3CQ9C0K3 210 aaPredicted RBP8.9□□□□□ -0.99
LINC01940-201ENST00000455228 POFUT1Q9H488 388 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 TMEM138Q9NPI0 162 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 CLEC4EQ9ULY5 219 aa8.9□□□□□ -0.99
LINC01940-201ENST00000455228 HEPACAM2A8MVW5 462 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 ISM1B1AKI9 464 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 J3QW42 95 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 LZTS3O60299 673 aaPredicted RBP8.89□□□□□ -0.99
LINC01940-201ENST00000455228 SLCO2B1O94956 709 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 IL3P08700 152 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 RD3LP0DJH9 198 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 CPEP16870 476 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 NPBWR1P48145 328 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 RPS20P60866 119 aaKnown RBP8.89□□□□□ -0.99
LINC01940-201ENST00000455228 POLR2LP62875 67 aaKnown RBP8.89□□□□□ -0.99
LINC01940-201ENST00000455228 FKBP1BP68106 108 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 GPR176Q14439 515 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 PLK5Q496M5 336 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 NKAIN1Q4KMZ8 207 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 TMEM201Q5SNT2 666 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 Q6ZVL8 140 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 LILRA3Q8N6C8 439 aaPredicted RBP8.89□□□□□ -0.99
LINC01940-201ENST00000455228 SLC38A5Q8WUX1 472 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 HAS2Q92819 552 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 MVB12AQ96EY5 273 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 TMEM19Q96HH6 336 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 C7orf50Q9BRJ6 194 aaKnown RBP8.89□□□□□ -0.99
LINC01940-201ENST00000455228 FNDC11Q9BVV2 318 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 SLC6A16Q9GZN6 736 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 GAR1Q9NY12 217 aaKnown RBP8.89□□□□□ -0.99
LINC01940-201ENST00000455228 CALML5Q9NZT1 146 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 RPH3ALQ9UNE2 315 aa8.89□□□□□ -0.99
LINC01940-201ENST00000455228 ELOA3CA0A087WX78 387 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms