RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 PRSS23O95084 383 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 TGM6O95932 706 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 MT-ND1P03886 318 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 OPN1LWP04000 364 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 CD8BP10966 210 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 IMPDH2P12268 514 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 FPR1P21462 350 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 IFNGR2P38484 337 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 PEX19P40855 299 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 CTBP2P56545 445 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 ADORA2A-AS1P86434 159 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 VLDLRP98155 873 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 POU4F3Q15319 338 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 GUSBP1Q15486 140 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 TAF11Q15544 211 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 OR7A5Q15622 319 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 TMEM201Q5SNT2 666 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 OTUD3Q5T2D3 398 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 C1orf146Q5VVC0 180 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 PPP4R4Q6NUP7 873 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 C3P1Q6ZMU1 363 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 FAM214BQ7L5A3 538 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 STK32CQ86UX6 486 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 SPATA24Q86W54 205 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 CDK20Q8IZL9 346 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 MARVELD2Q8N4S9 558 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 FAM86B1Q8N7N1 296 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 OR6K3Q8NGY3 331 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 LILRB4Q8NHJ6 448 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 CA5BP1Q8WTZ4 195 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 LIPHQ8WWY8 451 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 SDCCAG3Q96C92 435 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 KTI12Q96EK9 354 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 RSRC1Q96IZ7 334 aaKnown RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 PTDSS2Q9BVG9 487 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 NDEL1Q9GZM8 345 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 NMNAT1Q9HAN9 279 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 PARPBPQ9NWS1 579 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 MRPL39Q9NYK5 338 aaKnown RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 C6orf203Q9P0P8 240 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 KLHL13Q9P2N7 655 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 Q9UFV3 132 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 ZNF229Q9UJW7 825 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 TMCC3Q9ULS5 477 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 RNF6Q9Y252 685 aa7.77□□□□□ -1.17
COL28A1-205ENST00000453441 KLF2Q9Y5W3 355 aaPredicted RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 SPTAN1Q13813 2472 aaKnown RBP7.77□□□□□ -1.17
COL28A1-205ENST00000453441 A0A1W2PNV4 684 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 OR6C65A6NJZ3 312 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 hCG_2039718K7EN88 272 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 FFAR1O14842 300 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 AKAP8O43823 692 aaKnown RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 ZG16O60844 167 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 AQP8O94778 261 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 ALX3O95076 343 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 OR6A2O95222 327 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 GADD45GO95257 159 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 CLDN14O95500 239 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 CNOT4O95628 575 aaKnown RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 THY1P04216 161 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 HIST1H2ABP04908 130 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 YES1P07947 543 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 RPS5P46782 204 aaKnown RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 SLC9A3P48764 834 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 SPIBQ01892 262 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 RASGEF1BQ0VAM2 473 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 ZNF74Q16587 644 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 FBXL19-AS1Q494R0 122 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 IQCCQ4KMZ1 466 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 TMEM225Q6GV28 225 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 ZNF730Q6ZMV8 503 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 WDR88Q6ZMY6 472 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 MBOAT2Q6ZWT7 520 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 H1FNTQ75WM6 255 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 HIST3H2AQ7L7L0 130 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 TSPYL5Q86VY4 417 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 NKAIN4Q8IVV8 208 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 ADGRG5Q8IZF4 528 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 RPRMLQ8N4K4 120 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 C10orf53Q8N6V4 93 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 PAPD5Q8NDF8 572 aaKnown RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 TMEM255BQ8WV15 326 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 ITLN2Q8WWU7 325 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 HIST1H2ACQ93077 130 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 TAAR8Q969N4 342 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 SGTBQ96EQ0 304 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 DUS3LQ96G46 650 aaKnown RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 SEPHS2Q99611 448 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 PSD2Q9BQI7 771 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 CHST11Q9NPF2 352 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 KCNJ16Q9NPI9 418 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 NANSQ9NR45 359 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 MAN2C1Q9NTJ4 1040 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 CCM2LQ9NUG4 571 aaPredicted RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 PROCRQ9UNN8 238 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 AURKCQ9UQB9 309 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 V9GYQ6 96 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 GCN1Q92616 2671 aaKnown RBP7.76□□□□□ -1.17
COL28A1-205ENST00000453441 CACNA1CQ13936 2221 aa7.76□□□□□ -1.17
COL28A1-205ENST00000453441 ENO4A6NNW6 628 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms