RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TFPIP10646 304 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 DBTP11182 482 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 PIPP12273 146 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 HIST1H1CP16403 213 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 SLC2A5P22732 501 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 EEF1B2P24534 225 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ACVR2AP27037 513 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 NOS3P29474 1203 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 C21orf33P30042 268 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 IDUAP35475 653 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 RPL4P36578 427 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 EIF2S3P41091 472 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CDKN2AP42771 156 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 RPL5P46777 297 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 TNFSF10P50591 281 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 NR1H2P55055 460 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 GFRA1P56159 465 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 RAC1P63000 192 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 EMX1Q04741 257 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ZNF91Q05481 1191 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 DBPQ10586 325 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ST3GAL4Q11206 333 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 MYBPHQ13203 477 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 PMS2P3Q13401 168 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CRMP1Q14194 572 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 MFSD13AQ14CX5 517 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 OR7A5Q15622 319 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 TMEM176BQ3YBM2 270 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 NADK2Q4G0N4 442 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ALG10Q5BKT4 473 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 WIPI1Q5MNZ9 446 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 NXNL2Q5VZ03 156 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 SLC6A19Q695T7 634 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 C3orf33Q6P1S2 294 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 PLBD1Q6P4A8 553 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ARHGAP11AQ6P4F7 1023 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 TMPPEQ6ZT21 453 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 KCTD8Q6ZWB6 473 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 AHSA2Q719I0 299 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 H1FNTQ75WM6 255 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 HIST3H2AQ7L7L0 130 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CXXC5Q7LFL8 322 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 PRSS48Q7RTY5 328 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 GALNTL5Q7Z4T8 443 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 NANOGNBQ7Z5D8 188 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 YRDCQ86U90 279 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 EXD3Q8N9H8 876 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 SCAIQ8N9R8 606 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ZFP62Q8NB50 900 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 SLC37A3Q8NCC5 494 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 NPEPL1Q8NDH3 523 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 FAM83FQ8NEG4 500 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 OR52E2Q8NGJ4 325 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 OR4K13Q8NH42 304 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ZNF417Q8TAU3 575 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 SLC25A43Q8WUT9 341 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 HIST1H2ACQ93077 130 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 TMIGD2Q96BF3 282 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 RASD2Q96D21 266 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 PLEKHA8Q96JA3 519 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 C5orf34Q96MH7 638 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 TSPAN32Q96QS1 320 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ZNF587Q96SQ5 575 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 SMAD5Q99717 465 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 COPS4Q9BT78 406 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 KATNB1Q9BVA0 655 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 TEX12Q9BXU0 123 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 PRRG3Q9BZD7 231 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 NMNAT2Q9BZQ4 307 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ZNF703Q9H7S9 590 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 MED20Q9H944 212 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 FGF20Q9NP95 211 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CCNB1IP1Q9NPC3 277 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CHST11Q9NPF2 352 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 KLHL1Q9NR64 748 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 ALKBH4Q9NXW9 302 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CNOT2Q9NZN8 540 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 KLHL21Q9UJP4 597 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 DKKL1Q9UK85 242 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 BOKQ9UMX3 212 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 TRAPPC4Q9Y296 219 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 EXOGQ9Y2C4 368 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 KLF13Q9Y2Y9 288 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 HDGFL3Q9Y3E1 203 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 RPL36Q9Y3U8 105 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CSAG2Q9Y5P2 127 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 CORINQ9Y5Q5 1042 aa5.39□□□□□ -1.55
SDC4P-201ENST00000453285 SPIN1Q9Y657 262 aaPredicted RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 INTS1Q8N201 2190 aaKnown RBP5.39□□□□□ -1.55
SDC4P-201ENST00000453285 IGF2RP11717 2491 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 TEX13CA0A0J9YWL9 993 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 OR6C68A6NDL8 312 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 EFCAB10A6NFE3 127 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 RIIAD1A6NNX1 92 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 ZNF814B7Z6K7 855 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 PRR23D1E9PI22 279 aaPredicted RBP5.38□□□□□ -1.55
SDC4P-201ENST00000453285 C11orf98E9PRG8 122 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 KLRC4-KLRK1H3BQV0 150 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 J3QRE1 110 aa5.38□□□□□ -1.55
SDC4P-201ENST00000453285 RAMP1O60894 148 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms