RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 ERGIC3Q9Y282 383 aa7.48□□□□□ -1.21
NECAP1-202ENST00000450991 YARS2Q9Y2Z4 477 aaKnown RBP7.48□□□□□ -1.21
NECAP1-202ENST00000450991 WIF1Q9Y5W5 379 aa7.48□□□□□ -1.21
NECAP1-202ENST00000450991 CHCHD2Q9Y6H1 151 aaPredicted RBP7.48□□□□□ -1.21
NECAP1-202ENST00000450991 CNTRLQ7Z7A1 2325 aa7.48□□□□□ -1.21
NECAP1-202ENST00000450991 TMEM129A0AVI4 362 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SHISA8B8ZZ34 492 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 PRR23D1E9PI22 279 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 AHCYL1O43865 530 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 TMCC2O75069 709 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 IFNGP01579 166 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 IGHA1P01876 353 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SERPINA7P05543 415 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 PRR23D2P0DMB1 279 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 CCL3P10147 92 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 HIST1H1CP16403 213 aaKnown RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 ITGA3P26006 1051 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 NOS3P29474 1203 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 CASP3P42574 277 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 HTR3AP46098 478 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 RPS5P46782 204 aaKnown RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SPCS2Q15005 226 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 MED22Q15528 200 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 C1QL3Q5VWW1 255 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 THOC7Q6I9Y2 204 aaKnown RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 C19orf48Q6RUI8 117 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 ARSKQ6UWY0 536 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SHFQ7M4L6 423 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 OR4F15Q8NGB8 312 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 KIAA1143Q96AT1 154 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 DDOQ99489 341 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 MGLLQ99685 303 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 ZNF649Q9BS31 505 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 DCUN1D5Q9BTE7 237 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 CPNE5Q9HCH3 593 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 H2AFY2Q9P0M6 372 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 PPP4R1LQ9P1A2 415 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 KLHL21Q9UJP4 597 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 VDAC3Q9Y277 283 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 EXOSC1Q9Y3B2 195 aaKnown RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 ADAM18Q9Y3Q7 739 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 IER3IP1Q9Y5U9 82 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 A8MVM7 634 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 NKX2-8O15522 239 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 IDH3BO43837 385 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SCG5P05408 212 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 LIMS3P0CW19 117 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 LIMS4P0CW20 117 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 ICAM2P13598 275 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 WT1P19544 449 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 AQP2P41181 271 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 RGS6P49758 472 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 CAMK2BQ13554 666 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SSX1Q16384 188 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SLC25A53Q5H9E4 307 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 DCAF10Q5QP82 559 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 H3F3CQ6NXT2 135 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 MZT2BQ6NZ67 158 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 OPN5Q6U736 354 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 FAM122BQ7Z309 247 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 MDGA2Q7Z553 956 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 C10orf53Q8N6V4 93 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 ZNF485Q8NCK3 441 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 STK35Q8TDR2 534 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 PSMF1Q92530 271 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 RPL3LQ92901 407 aaKnown RBP7.47□□□□□ -1.21
NECAP1-202ENST00000450991 KATNB1Q9BVA0 655 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 B3GNT4Q9C0J1 378 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SH2D2AQ9NP31 389 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 SDHAF3Q9NRP4 125 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 HPF1Q9NWY4 346 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 FBXL2Q9UKC9 423 aa7.47□□□□□ -1.21
NECAP1-202ENST00000450991 TRABD2BA6NFA1 517 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 SLC22A31A6NKX4 558 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 A6NL46 340 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 BLOC1S5-TXNDC5H3BN57 136 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 TP53I11O14683 189 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 MYL12BO14950 172 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 SLC22A1O15245 554 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 SLC25A12O75746 678 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 MT-ATP6P00846 226 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 HSMCR30P0CW71 290 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 CLUP10909 449 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 LIPCP11150 499 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 APEHP13798 732 aaKnown RBP7.46□□□□□ -1.22
NECAP1-202ENST00000450991 ZNF182P17025 639 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-202ENST00000450991 MYL12AP19105 171 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 GADD45AP24522 165 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 CD82P27701 267 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 RPL4P36578 427 aaKnown RBP7.46□□□□□ -1.22
NECAP1-202ENST00000450991 RANBP1P43487 201 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 ERVK-25P63136 954 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 RPL18Q07020 188 aaKnown RBP7.46□□□□□ -1.22
NECAP1-202ENST00000450991 DBPQ10586 325 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-202ENST00000450991 FOXC1Q12948 553 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 MLLT11Q13015 90 aaPredicted RBP7.46□□□□□ -1.22
NECAP1-202ENST00000450991 SNTA1Q13424 505 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 SPHARQ15513 63 aa7.46□□□□□ -1.22
NECAP1-202ENST00000450991 TSTQ16762 297 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms