RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NKAIN3Q8N8D7 197 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR8G5Q8NG78 346 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GPR148Q8TDV2 347 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ADAMTS15Q8TE58 950 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ASB17Q8WXJ9 295 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TNFRSF14Q92956 283 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TSLPQ969D9 159 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MRPS24Q96EL2 167 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 PDLIM5Q96HC4 596 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 FAM71F1Q96KD3 344 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 SLC2A13Q96QE2 648 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GPER1Q99527 375 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 AMBRA1Q9C0C7 1298 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MTIF3Q9H2K0 278 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 SRMSQ9H3Y6 488 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ZNF286AQ9HBT8 521 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 AMBNQ9NP70 447 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CRTAC1Q9NQ79 661 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PXMP2Q9NR77 195 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GAB2Q9UQC2 676 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 POLR1DQ9Y2S0 133 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CHTOPQ9Y3Y2 248 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 SCN7AQ01118 1682 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TNS1Q9HBL0 1735 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 XKRY2A2RUG3 117 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR5H14A6NHG9 310 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ZAR1LA6NP61 321 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ZNF814B7Z6K7 855 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 M0R1X1 148 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 DNASE2O00115 360 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 CLDN4O14493 209 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PRKRAO75569 313 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 DEDDO75618 318 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 RECQL4O94761 1208 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PAPLNO95428 1278 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CTSLP07711 333 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ACAA1P09110 424 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 CD3GP09693 182 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 STAG3L3P0CL85 134 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HKR1P10072 659 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CD37P11049 281 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 VIPR1P32241 457 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SRP14P37108 136 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 PIGAP37287 484 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TSPAN7P41732 249 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 FASLGP48023 281 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MTCP1P56278 107 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ARFRP1Q13795 201 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GRM7Q14831 915 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 RGNQ15493 299 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HLA-BQ31612 363 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ARHGAP11BQ3KRB8 267 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ACSM3Q53FZ2 586 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 FFAR4Q5NUL3 377 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 EXOSC6Q5RKV6 272 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 MANEAQ5SRI9 462 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SAMD13Q5VXD3 122 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 NKAIN2Q5VXU1 208 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 C18orf63Q68DL7 685 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TMEM88Q6PEY1 159 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 LCTLQ6UWM7 567 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 LYPD8Q6UX82 237 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 Q6ZRG5 221 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SH2D5Q6ZV89 423 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CHST9Q7L1S5 443 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OOSP2Q86WS3 158 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GLIS1Q8NBF1 620 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 RELL2Q8NC24 303 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 SDR9C7Q8NEX9 313 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SLC26A10Q8NG04 563 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR4K1Q8NGD4 311 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR10A7Q8NGE5 316 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR4C15Q8NGM1 316 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GOT1L1Q8NHS2 421 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 OLIG1Q8TAK6 271 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 LKAAEAR1Q8TD35 194 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 FRZBQ92765 325 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 REEP6Q96HR9 211 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MRGPRX4Q96LA9 322 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CCDC74BQ96LY2 380 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ADAD1Q96M93 576 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 UBL7Q96S82 380 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 NTPCRQ9BSD7 190 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 ABHD16BQ9H3Z7 469 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GSX1Q9H4S2 264 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 FKBP11Q9NYL4 201 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 FOXJ2Q9P0K8 574 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ING1Q9UK53 422 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 FBXO4Q9UKT5 387 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 USP22Q9UPT9 525 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PHLPP1O60346 1717 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TMEM212A6NML5 194 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR52A4PA6NMU1 304 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ZNF878C9JN71 531 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MBTPS2O43462 519 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ERAL1O75616 437 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 STK17BO94768 372 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ADH1BP00325 375 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 NMBP08949 121 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 INSRRP14616 1297 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms