RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 GREM1O60565 184 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 AMY2AP04746 511 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 RPLP2P05387 115 aaKnown RBP12.91□□□□□ -0.34
CHFR-205ENST00000450056 HFEQ30201 348 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 RHOUQ7L0Q8 258 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 CD163Q86VB7 1156 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 GTPBP8Q8N3Z3 284 aaPredicted RBP12.91□□□□□ -0.34
CHFR-205ENST00000450056 COX18Q8N8Q8 333 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 SLC22A8Q8TCC7 542 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 HAVCR2Q8TDQ0 301 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 MS4A4EQ96PG1 132 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 ARHGDIGQ99819 225 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 ACTRT3Q9BYD9 372 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 WDR13Q9H1Z4 485 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 TMEM27Q9HBJ8 222 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 CTSFQ9UBX1 484 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 ST6GALNAC2Q9UJ37 374 aa12.91□□□□□ -0.34
CHFR-205ENST00000450056 C5orf51A6NDU8 294 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 OR52A4PA6NMU1 304 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 GRXCR1A8MXD5 290 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 PIN1P1O15428 100 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 CRYBA1P05813 215 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 HIST1H1TP22492 207 aaPredicted RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 ACTC1P68032 377 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 ACTA1P68133 377 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 DUSP5Q16690 384 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 RBMS3Q6XE24 437 aaKnown RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 ATG5Q9H1Y0 275 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 HRH4Q9H3N8 390 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 HCFC1R1Q9NWW0 138 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 RNF186Q9NXI6 227 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 TVP23AA6NH52 213 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 BLOC1S5-TXNDC5H3BN57 136 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 NRG2O14511 850 aaPredicted RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 GSTZ1O43708 216 aaPredicted RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 CPN1P15169 458 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 CST5P28325 142 aaPredicted RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 TDGQ13569 410 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 NNATQ16517 81 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 PABPC1L2AQ5JQF8 200 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 PWWP2BQ6NUJ5 590 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 MCATQ8IVS2 390 aaKnown RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 NAXDQ8IW45 347 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 LNX2Q8N448 690 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 TSEN15Q8WW01 171 aaKnown RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 WDR34Q96EX3 536 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 ADAD1Q96M93 576 aaKnown RBP12.9□□□□□ -0.34
CHFR-205ENST00000450056 SLC46A2Q9BY10 475 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 NDRG3Q9UGV2 375 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 PPIL1Q9Y3C6 166 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 FAM96BQ9Y3D0 163 aa12.9□□□□□ -0.34
CHFR-205ENST00000450056 TRAV1-2A0A0B4J238 106 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 OR5H14A6NHG9 310 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 ELOA3DA6NLF2 546 aaPredicted RBP12.89□□□□□ -0.35
CHFR-205ENST00000450056 SNRPGP15A8MWD9 76 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 OR2A4O95047 310 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 ZFPL1O95159 310 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 PCDH8O95206 1070 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 FABP1P07148 127 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
CHFR-205ENST00000450056 CSNK1G2P78368 415 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 ELOA3BQ3SY89 546 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 INO80EQ8NBZ0 244 aaPredicted RBP12.89□□□□□ -0.35
CHFR-205ENST00000450056 ELOA3Q8NG57 546 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 OR7G2Q8NG99 324 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 OR14A16Q8NHC5 309 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 C10orf90Q96M02 699 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 OR2A7Q96R45 310 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 MTHFD2LQ9H903 347 aaPredicted RBP12.89□□□□□ -0.35
CHFR-205ENST00000450056 MEPEQ9NQ76 525 aaPredicted RBP12.89□□□□□ -0.35
CHFR-205ENST00000450056 TMEM72A0PK05 275 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 HTR2AP28223 471 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 CSF2RBP32927 897 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 TMEM215Q68D42 235 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 FAM220AQ7Z4H9 259 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 FOXRED2Q8IWF2 684 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 PM20D2Q8IYS1 436 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 SFT2D1Q8WV19 159 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 VN1R3Q9BXE9 311 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
CHFR-205ENST00000450056 NCDNQ9UBB6 729 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 A0A0B4J2A0 478 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 POLR2GP62487 172 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHFR-205ENST00000450056 SNTB1Q13884 538 aaKnown RBP12.89□□□□□ -0.35
CHFR-205ENST00000450056 DPPA4Q7L190 304 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 TMPRSS9Q7Z410 1059 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 RAB42Q8N4Z0 105 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 RASD2Q96D21 266 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 IGSF21Q96ID5 467 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 SLC25A32Q9H2D1 315 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 SHPKQ9UHJ6 478 aa12.89□□□□□ -0.35
CHFR-205ENST00000450056 WASH3PC4AMC7 463 aa12.88□□□□□ -0.35
CHFR-205ENST00000450056 C4orf51C9J302 202 aa12.88□□□□□ -0.35
CHFR-205ENST00000450056 J3QRE1 110 aa12.88□□□□□ -0.35
CHFR-205ENST00000450056 ABCD4O14678 606 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms