RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 IDH3BO43837 385 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 MPZL2O60487 215 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 CRYABP02511 175 aaKnown RBP17.27■□□□□ 0.36
RPS28-202ENST00000449223 OPN1LWP04000 364 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 HMGN1P05114 100 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 CD14P08571 375 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 CPN1P15169 458 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 GABRB1P18505 474 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 PUDPQ08623 228 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 PMS2P3Q13401 168 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 GXYLT1Q4G148 440 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 CASP12Q6UXS9 341 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 FAM122BQ7Z309 247 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 ENTHD1Q8IYW4 607 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 IQCF1Q8N6M8 205 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 OR2V1Q8NHB1 315 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 FAM81AQ8TBF8 368 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 TEX12Q9BXU0 123 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 POLDIP3Q9BY77 421 aaKnown RBP17.27■□□□□ 0.36
RPS28-202ENST00000449223 IL20RAQ9UHF4 553 aa17.27■□□□□ 0.36
RPS28-202ENST00000449223 TPRP12270 2363 aaKnown RBP17.27■□□□□ 0.36
RPS28-202ENST00000449223 AQP7P3A6NL99 342 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 MS4A18H0YCH9 400 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 IMPA2O14732 288 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 TNFSF11O14788 317 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 SURF4O15260 269 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 SEC14L5O43304 696 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 TXNDC12O95881 172 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 IGHMP01871 453 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 STARP49675 285 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 SUCLG1P53597 346 aaKnown RBP17.26■□□□□ 0.35
RPS28-202ENST00000449223 OR2B6P58173 313 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 SNRPGP62308 76 aaKnown RBP17.26■□□□□ 0.35
RPS28-202ENST00000449223 MS4A18Q3C1V0 323 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 SLC25A30Q5SVS4 291 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 PDSS1Q5T2R2 415 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 Q8NA96 180 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 OR8J1Q8NGP2 316 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 RHOXF1Q8NHV9 184 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 SMPDL3BQ92485 455 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 DNAJA3Q96EY1 480 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 IFT27Q9BW83 186 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 DEFB127Q9H1M4 99 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 PAQR5Q9NXK6 330 aaPredicted RBP17.26■□□□□ 0.35
RPS28-202ENST00000449223 AQP7O14520 342 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 EIF1AYO14602 144 aaKnown RBP17.26■□□□□ 0.35
RPS28-202ENST00000449223 AKR7A3O95154 331 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 ADORA3P0DMS8 318 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 PCYT1AP49585 367 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 MYBPC1Q00872 1141 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 FOXK2Q01167 660 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 CD47Q08722 323 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 PDK3Q15120 406 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 NADK2Q4G0N4 442 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 EMC4Q5J8M3 183 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 HBMQ6B0K9 141 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 ARHGAP11AQ6P4F7 1023 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 PXKQ7Z7A4 578 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 OR10D3Q8NH80 312 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 CPNE4Q96A23 557 aaPredicted RBP17.26■□□□□ 0.35
RPS28-202ENST00000449223 SLC38A2Q96QD8 506 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 TIMP4Q99727 224 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 KATNB1Q9BVA0 655 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 LDAHQ9H6V9 325 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 ZNF71Q9NQZ8 489 aaPredicted RBP17.26■□□□□ 0.35
RPS28-202ENST00000449223 CMC2Q9NRP2 79 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 IMPAD1Q9NX62 359 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 ZNF226Q9NYT6 803 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 B3GAT1Q9P2W7 334 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 RNF6Q9Y252 685 aa17.26■□□□□ 0.35
RPS28-202ENST00000449223 H0YC42 278 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 VAMP5O95183 116 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 TPD52P55327 224 aaPredicted RBP17.25■□□□□ 0.35
RPS28-202ENST00000449223 CARD18P57730 90 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 MAD2L1BPQ15013 274 aaPredicted RBP17.25■□□□□ 0.35
RPS28-202ENST00000449223 POU4F3Q15319 338 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 ZNF324BQ6AW86 544 aaPredicted RBP17.25■□□□□ 0.35
RPS28-202ENST00000449223 GPR139Q6DWJ6 353 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 KRT80Q6KB66 452 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 NHLRC1Q6VVB1 395 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 MEIOBQ8N635 442 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 TMEM99Q8N816 258 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 ANKK1Q8NFD2 765 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 ZHX1-C8orf76Q96EF9 292 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 NR1H4Q96RI1 486 aaPredicted RBP17.25■□□□□ 0.35
RPS28-202ENST00000449223 PRDM14Q9GZV8 571 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 TIGARQ9NQ88 270 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 INIPQ9NRY2 104 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 PNPLA3Q9NST1 481 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 SPRR3Q9UBC9 169 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 RASD1Q9Y272 281 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 PCDHGB5Q9Y5G0 923 aa17.25■□□□□ 0.35
RPS28-202ENST00000449223 RNF13O43567 381 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 OR6A2O95222 327 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 PPP1R3DO95685 299 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 SFTPCP11686 197 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 SDHAP31040 664 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 RPL4P36578 427 aaKnown RBP17.24■□□□□ 0.35
RPS28-202ENST00000449223 CTXN1P60606 82 aa17.24■□□□□ 0.35
RPS28-202ENST00000449223 IL5RAQ01344 420 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms