RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ZCCHC14Q8WYQ9 949 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 PSMG2Q969U7 264 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF845Q96IR2 970 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 DUSP9Q99956 384 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 KIF26BQ2KJY2 2108 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 PHF1O43189 567 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 NUDT21O43809 227 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 GSRP00390 522 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 POLR2CP19387 275 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR10A3P58181 314 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SRYQ05066 204 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 NSDHLQ15738 373 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 NKAIN3Q8N8D7 197 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR5AR1Q8NGP9 310 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 RAB37Q96AX2 223 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 LPAR4Q99677 370 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 EBF4Q9BQW3 602 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SLC25A32Q9H2D1 315 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 RHOFQ9HBH0 211 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OLAHQ9NV23 265 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF443Q9Y2A4 671 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 BIVM-ERCC5R4GMW8 1640 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 A0A0B4J203 849 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF716A6NP11 495 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 LOC730098B7Z3J9 87 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 M0R3E3 92 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ARPC3O15145 178 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 RRASP10301 218 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 GPM6AP51674 278 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 GPLD1P80108 840 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 OR10J5Q8NHC4 309 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CXorf58Q96LI9 332 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SEC11CQ9BY50 192 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 THSD1Q9NS62 852 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 HSPB8Q9UJY1 196 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 AFDNP55196 1824 aaKnown RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 UPK3BL1B0FP48 263 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 UPK3BL2E5RIL1 263 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 DCTN6O00399 190 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SLC16A5O15375 505 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ST8SIA5O15466 376 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 IGHG1P01857 330 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 GIPP09681 153 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SDHBP21912 280 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 EMP3P54852 163 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SEC13P55735 322 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 MAML2Q8IZL2 1156 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ZFP62Q8NB50 900 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 FUBP3Q96I24 572 aaKnown RBP eCLIP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 OR5B2Q96R09 309 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 RANGRFQ9HD47 186 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 FAM206AQ9NX38 181 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ENPP5Q9UJA9 477 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SCML1Q9UN30 329 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CACNA1GO43497 2377 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 RD3LP0DJH9 198 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 TIA1P31483 386 aaKnown RBP eCLIP8.36□□□□□ -1.072e-17■■■■■ 41.7
NIPBL-202ENST00000448238 RBP2P50120 134 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CNN1P51911 297 aaKnown RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 MTCP1P56278 107 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CD226Q15762 336 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 NPAS1Q99742 590 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 EGLN1Q9GZT9 426 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ACSS2Q9NR19 701 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CNOT2Q9NZN8 540 aaKnown RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 PADI3Q9ULW8 664 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 PRDM15P57071 1507 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 RAF1P04049 648 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 C8orf89P0DMQ9 161 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 RPE65Q16518 533 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM184AQ6ZMB5 413 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 Q6ZN92 141 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 NRMQ8IXM6 262 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 UBAC2Q8NBM4 344 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 PRSS3P2Q8NHM4 247 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SEH1LQ96EE3 360 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 TEAD3Q99594 435 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 MED17Q9NVC6 651 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 HRASLS2Q9NWW9 162 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 FBXL2Q9UKC9 423 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SCN5AQ14524 2016 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ANKRD66B4E2M5 251 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 CACNG3O60359 315 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 FAM163BP0C2L3 166 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 NME1P15531 152 aaKnown RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 COX5AP20674 150 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 AOAHP28039 575 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 GABRA5P31644 462 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 TOB1P50616 345 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ETV3LQ6ZN32 361 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 LRRC56Q8IYG6 542 aaPredicted RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ADGRG5Q8IZF4 528 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 RBFOX1Q9NWB1 397 aaKnown RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 MARCH5Q9NX47 278 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 PITPNC1Q9UKF7 332 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.36□□□□□ -1.074e-6■■■□□ 15.9
NIPBL-202ENST00000448238 ATG2BQ96BY7 2078 aa8.36□□□□□ -1.07
NIPBL-202ENST00000448238 ZFC3H1O60293 1989 aaKnown RBP8.36□□□□□ -1.07
NIPBL-202ENST00000448238 SMIM35A0A1B0GVV1 85 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms