RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MIB2Q96AX9 1013 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 WBP1Q96G27 269 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 SEC22CQ9BRL7 303 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 GPN1Q9HCN4 374 aaPredicted RBP17.46■□□□□ 0.39
SDCBP-204ENST00000447182 TAS2R10Q9NYW0 307 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 CA5BQ9Y2D0 317 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF337Q9Y3M9 751 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 C5orf42Q9H799 3197 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 OR2M5A3KFT3 312 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 OR6C74A6NCV1 312 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 OR6C65A6NJZ3 312 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 EFCAB7A8K855 629 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 IDSB3KWA1 339 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 NPIPB9F8W1W9 429 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 NDUFB6O95139 128 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 NFATC4Q14934 902 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 LINC00303Q3SY05 128 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 LINC01590Q5TEZ4 76 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 RNF44Q7L0R7 432 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 MEIOBQ8N635 442 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 OR6K6Q8NGW6 343 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 OR10G6Q8NH81 332 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 C1orf216Q8TAB5 229 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 BAHD1Q8TBE0 780 aaPredicted RBP17.45■□□□□ 0.38
SDCBP-204ENST00000447182 ZPLD1Q8TCW7 415 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 PIGKQ92643 395 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 GPX7Q96SL4 187 aaPredicted RBP17.45■□□□□ 0.38
SDCBP-204ENST00000447182 LMAN2LQ9H0V9 348 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 CA10Q9NS85 328 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 HCN3Q9P1Z3 774 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 CREBL2O60519 120 aaPredicted RBP17.45■□□□□ 0.38
SDCBP-204ENST00000447182 ALDOBP05062 364 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 CXCL2P19875 107 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 PRKACBP22694 351 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 ART1P52961 327 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 STAC2Q6ZMT1 411 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 KCTD20Q7Z5Y7 419 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 SLC51BQ86UW2 128 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 OR4N2Q8NGD1 307 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 SFXN2Q96NB2 322 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 CHIAQ9BZP6 476 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 CAPN10Q9HC96 672 aa17.45■□□□□ 0.38
SDCBP-204ENST00000447182 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 PRR32B1ATL7 298 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 IMPA2O14732 288 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 CDK2P24941 298 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 KIR2DL1P43626 348 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 CLDN12P56749 244 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 RAB38P57729 211 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 PRPS1P60891 318 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 FAM53BQ14153 422 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 GPR18Q14330 331 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 ZNF267Q14586 743 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 STPG1Q5TH74 334 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 FAM198BQ6UWH4 519 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 C3P1Q6ZMU1 363 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 KANSL1Q7Z3B3 1105 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 RD3Q7Z3Z2 195 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 RBM18Q96H35 190 aaKnown RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 WDR92Q96MX6 357 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 MED9Q9NWA0 146 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 RDH8Q9NYR8 311 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 ZNF69Q9UC07 566 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 PCDHGA5Q9Y5G8 931 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 GNB5O14775 395 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 OR10H2O60403 315 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 NFYAP23511 347 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 MAPK3P27361 379 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 VEGFBP49765 207 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 PSMA6P60900 246 aaKnown RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 Q499Y3 187 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 TSACCQ96A04 125 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-204ENST00000447182 RASD2Q96D21 266 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 ELMOD3Q96FG2 381 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 VSTM2LQ96N03 204 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 PLA2G2FQ9BZM2 168 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 SLC19A3Q9BZV2 496 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 SLITRK2Q9H156 845 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 SFXN1Q9H9B4 322 aa17.44■□□□□ 0.38
SDCBP-204ENST00000447182 EML5Q05BV3 1969 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 BET1O15155 118 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 CTNSO60931 367 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 TACSTD2P09758 323 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 UBL4AP11441 157 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 DCTDP32321 178 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 MAGEB1P43366 347 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 LSSP48449 732 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 PSMD4P55036 377 aaKnown RBP17.43■□□□□ 0.38
SDCBP-204ENST00000447182 TAS2R20P59543 309 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 HTR4Q13639 388 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 YAF2Q8IY57 180 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 DND1Q8IYX4 353 aaKnown RBP17.43■□□□□ 0.38
SDCBP-204ENST00000447182 ALG12Q9BV10 488 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 SLC6A17Q9H1V8 727 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 TCF7L1Q9HCS4 588 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 RXFP3Q9NSD7 469 aa17.43■□□□□ 0.38
SDCBP-204ENST00000447182 hCG_1807616A0A1W2PRN6 198 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 MCRIP1C9JLW8 97 aa17.42■□□□□ 0.38
SDCBP-204ENST00000447182 L7N2F9 121 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms