RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FUT4P22083 530 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
HDAC4-204ENST00000446876 CLDN17P56750 224 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 SELENOWP63302 87 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 NIPAL3Q6P499 406 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 TTC33Q6PID6 262 aaPredicted RBP13.07□□□□□ -0.32
HDAC4-204ENST00000446876 H1FNTQ75WM6 255 aaPredicted RBP13.07□□□□□ -0.32
HDAC4-204ENST00000446876 NKAIN4Q8IVV8 208 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 FITM2Q8N6M3 262 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 ANKS4BQ8N8V4 417 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 FAM162AQ96A26 154 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 PLPPR2Q96GM1 343 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 HSH2DQ96JZ2 352 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 OXGR1Q96P68 337 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 ASPNQ9BXN1 380 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 PARPBPQ9NWS1 579 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 ASB6Q9NWX5 421 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 UPB1Q9UBR1 384 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 SNX13Q9Y5W8 968 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 MYO9AB2RTY4 2548 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 RAI1Q7Z5J4 1906 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-204ENST00000446876 A0A1W2PR80 420 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 CIB4A0PJX0 185 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 MS4A18H0YCH9 400 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 J3KTA2 159 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 PDLIM1O00151 329 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 OR5F1O95221 314 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 CH25HO95992 272 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 HLA-DOBP13765 273 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 ZNF43P17038 809 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 GGT1P19440 569 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 TCN1P20061 433 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-204ENST00000446876 UGT2B15P54855 530 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 PMS2P3Q13401 168 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 MS4A18Q3C1V0 323 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 BEX5Q5H9J7 111 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 GKAP1Q5VSY0 366 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-204ENST00000446876 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 CCDC197Q8NCU1 140 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 OR6S1Q8NH40 331 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 PFN4Q8NHR9 129 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 TMEM255BQ8WV15 326 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 LZICQ8WZA0 190 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-204ENST00000446876 ZNF426Q9BUY5 554 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 AMBRA1Q9C0C7 1298 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 SLCO5A1Q9H2Y9 848 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 TAS2R16Q9NYV7 291 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 ST6GALNAC2Q9UJ37 374 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 RIMS3Q9UJD0 308 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 ADAM21Q9UKJ8 722 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 B3GALT5Q9Y2C3 310 aa13.06□□□□□ -0.32
HDAC4-204ENST00000446876 CCDC168Q8NDH2 2452 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 NDUFAB1O14561 156 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 TRAF3IP2O43734 574 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-204ENST00000446876 PIP5K1CO60331 668 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 UPK3AO75631 287 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 SERPINI2O75830 405 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 PLAUP00749 431 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 CDH2P19022 906 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-204ENST00000446876 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-204ENST00000446876 IST1P53990 364 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 MXRA7P84157 204 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 C1DQ13901 141 aaKnown RBP13.05□□□□□ -0.32
HDAC4-204ENST00000446876 MFSD13AQ14CX5 517 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 ZNF74Q16587 644 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 PAMR1Q6UXH9 720 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 LINGO2Q7L985 606 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 WDFY1Q8IWB7 410 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 PGAM4Q8N0Y7 254 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 LRRC17Q8N6Y2 441 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 ADPRHL1Q8NDY3 354 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 OR52N5Q8NH56 324 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 HSD17B8Q92506 261 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 MPP4Q96JB8 637 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 PRRC1Q96M27 445 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 UBTD1Q9HAC8 227 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 MEPEQ9NQ76 525 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-204ENST00000446876 CCM2LQ9NUG4 571 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-204ENST00000446876 MRPL39Q9NYK5 338 aaKnown RBP13.05□□□□□ -0.32
HDAC4-204ENST00000446876 NPAP1Q9NZP6 1156 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 RHCGQ9UBD6 479 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 A4GNTQ9UNA3 340 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 CORINQ9Y5Q5 1042 aa13.05□□□□□ -0.32
HDAC4-204ENST00000446876 ALPK2Q86TB3 2170 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 OR5H1A6NKK0 313 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 ENO4A6NNW6 628 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 C11orf98E9PRG8 122 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 PLPP3O14495 311 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 MT-ATP6P00846 226 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 LSM11P83369 360 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC4-204ENST00000446876 POU3F1Q03052 451 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-204ENST00000446876 KRT72Q14CN4 511 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 PPA1Q15181 289 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 GABRA6Q16445 453 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 IFI44LQ53G44 452 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 CARD17Q5XLA6 110 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 GLYATQ6IB77 296 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 FKBP9P1Q75LS8 142 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms