RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CRLF1O75462 422 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 C1orf105O95561 183 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 OXSR1O95747 527 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 GNA14O95837 355 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 UMPSP11172 480 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PRKACBP22694 351 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ELK3P41970 407 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR1D4P47884 311 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PKNOX1P55347 436 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 XIAPP98170 497 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZFP36L1Q07352 338 aaKnown RBP3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ELAVL2Q12926 359 aaKnown RBP3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 STK38Q15208 465 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 HSP90B2PQ58FF3 399 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 HSP90AA4PQ58FG1 418 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 CARD16Q5EG05 197 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 LY6G6FQ5SQ64 297 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 MLIPQ5VWP3 458 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 C22orf42Q6IC83 251 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 FBXL22Q6P050 247 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PGAP1Q75T13 922 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PROKR2Q8NFJ6 384 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR9G4Q8NGQ1 327 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZPLD1Q8TCW7 415 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 LKAAEAR1Q8TD35 194 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ADAMTS16Q8TE57 1224 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 SETD7Q8WTS6 366 aaKnown RBP3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PIBF1Q8WXW3 757 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 UFD1Q92890 307 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 MSANTD3Q96H12 275 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 LRRC61Q9BV99 259 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 TM2D1Q9BX74 207 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 HCAR1Q9BXC0 346 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 RBKSQ9H477 322 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PNO1Q9NRX1 252 aaKnown RBP3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 WARS2Q9UGM6 360 aaKnown RBP3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 KLK13Q9UKR3 277 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ANGPTL2Q9UKU9 493 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 KCNIP3Q9Y2W7 256 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 SETBP1Q9Y6X0 1596 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZFYVE16Q7Z3T8 1539 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 ATP10BO94823 1461 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 HCFC1P51610 2035 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 SETD1AO15047 1707 aaKnown RBP3.53□□□□□ -1.85
HMGB1P48-201ENST00000446155 NPATQ14207 1427 aa3.53□□□□□ -1.85
HMGB1P48-201ENST00000446155 C9orf84Q5VXU9 1444 aa3.53□□□□□ -1.85
HMGB1P48-201ENST00000446155 FRMPD3Q5JV73 1810 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 LOC100131303A0A0U1RQF7 123 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 KBTBD11-OT1A0A1B0GTJ5 212 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 A0A1B0GUH1 482 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 FOXI3A8MTJ6 420 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 HSBP1L1C9JCN9 74 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 PSMD11O00231 422 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 RAB29O14966 203 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 CHST1O43916 411 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 NMT2O60551 498 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 CABYRO75952 493 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR7A10O76100 309 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 TBX6O95947 436 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 SERPINE2P07093 398 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 GATA1P15976 413 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 ABOP16442 354 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 DCKP27707 260 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 ANP32AP39687 249 aaKnown RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 VHLP40337 213 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 HMGCS2P54868 508 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 SELENBP1Q13228 472 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR5I1Q13606 314 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 KCNJ11Q14654 390 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 OXA1LQ15070 435 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 SIX1Q15475 284 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 DGUOKQ16854 277 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 FAM83EQ2M2I3 478 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 CNPY1Q3B7I2 92 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZNF829Q3KNS6 432 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 KRT71Q3SY84 523 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 BEX5Q5H9J7 111 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR52W1Q6IF63 320 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZNF343Q6P1L6 599 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 ARMCX5Q6P1M9 558 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 RFWD3Q6PCD5 774 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 CCDC137Q6PK04 289 aaKnown RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 SCARA5Q6ZMJ2 495 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 Q6ZSR3 168 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC25A48Q6ZT89 311 aaKnown RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 TCAIMQ8N3R3 496 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 ASB9Q96DX5 294 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 TBX15Q96SF7 602 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 OCR1Q9BZK8 76 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 CHMP4BQ9H444 224 aaKnown RBP3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 SYNDIG1Q9H7V2 258 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 AMBNQ9NP70 447 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 GPATCH2LQ9NWQ4 482 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 B3GNT2Q9NY97 397 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 CLN8Q9UBY8 286 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 RIMS3Q9UJD0 308 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 RNF24Q9Y225 148 aa3.52□□□□□ -1.85
HMGB1P48-201ENST00000446155 L3MBTL1Q9Y468 752 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms