RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 EIF4E2O60573 245 aaKnown RBP12.87□□□□□ -0.35
NCLP1-201ENST00000445357 HLA-DMAP28067 261 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 AFF3P51826 1226 aaKnown RBP12.87□□□□□ -0.35
NCLP1-201ENST00000445357 CTXN1P60606 82 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 HLA-DQA1Q5Y7H0 255 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 PLET1Q6UQ28 207 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 IL20RBQ6UXL0 311 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 OVCH1Q7RTY7 1134 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 PRR22Q8IZ63 422 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 ZNF563Q8TA94 476 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 TRMT10AQ8TBZ6 339 aaKnown RBP12.87□□□□□ -0.35
NCLP1-201ENST00000445357 SLC7A6Q92536 515 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 TP53INP1Q96A56 240 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 ZNF486Q96H40 463 aaPredicted RBP12.87□□□□□ -0.35
NCLP1-201ENST00000445357 WWTR1Q9GZV5 400 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 FKRPQ9H9S5 495 aa12.87□□□□□ -0.35
NCLP1-201ENST00000445357 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 TRBV2A0A0J9YWF9 115 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 OR6C76A6NM76 312 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 EDNRAP25101 427 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 IL12BP29460 328 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 NR4A2P43354 598 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 CLDN20P56880 219 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 ZP2Q05996 745 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 RPL18Q07020 188 aaKnown RBP12.86□□□□□ -0.35
NCLP1-201ENST00000445357 VWA2Q5GFL6 755 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 CEP78Q5JTW2 689 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 SNAP47Q5SQN1 464 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 ARHGAP40Q5TG30 622 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 WDR74Q6RFH5 385 aaPredicted RBP12.86□□□□□ -0.35
NCLP1-201ENST00000445357 SLC16A9Q7RTY1 509 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 NANOGNBQ7Z5D8 188 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 GHDCQ8N2G8 530 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 ZNF441Q8N8Z8 693 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 OR1N1Q8NGS0 311 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 TRIM63Q969Q1 353 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 ZNF501Q96CX3 271 aaPredicted RBP12.86□□□□□ -0.35
NCLP1-201ENST00000445357 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
NCLP1-201ENST00000445357 KLHDC3Q9BQ90 382 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 RTN4RQ9BZR6 473 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 RPRD1BQ9NQG5 326 aaKnown RBP12.86□□□□□ -0.35
NCLP1-201ENST00000445357 RXFP3Q9NSD7 469 aa12.86□□□□□ -0.35
NCLP1-201ENST00000445357 DLL1O00548 723 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 FLRT2O43155 660 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 CDC40O60508 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 CPNE3O75131 537 aaKnown RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 PITPNBP48739 271 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 INPP1P49441 399 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 NKX2-5P52952 324 aaPredicted RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 PLCXD2Q0VAA5 305 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 NSDHLQ15738 373 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 TBRG1Q3YBR2 411 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 HACD4Q5VWC8 232 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 SLC6A19Q695T7 634 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 GPR139Q6DWJ6 353 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 UBE2J2Q8N2K1 259 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 PLPP5Q8NEB5 264 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 TAAR8Q969N4 342 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 CLDN23Q96B33 292 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 WACQ9BTA9 647 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 NRSN2Q9GZP1 204 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 CCDC86Q9H6F5 360 aaKnown RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 COPS7AQ9UBW8 275 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 CPAMD8Q8IZJ3 1885 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 TTC28Q96AY4 2481 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 FAM240BA0A1B0GVZ2 78 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 C4orf47A7E2U8 309 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 A8MU76 341 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 PRR32B1ATL7 298 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 HCRTR2O43614 444 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 TRIM3O75382 744 aaPredicted RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 BGLAPP02818 100 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 EPXP11678 715 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 ATF1P18846 271 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 NR0B1P51843 470 aaKnown RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 PNLIPRP2P54317 469 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 MESTQ5EB52 335 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 WDR45BQ5MNZ6 344 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 SLC29A4Q7RTT9 530 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 KCTD20Q7Z5Y7 419 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 HAVCR2Q8TDQ0 301 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 HLA-CQ95604 372 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 RFT1Q96AA3 541 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 OMA1Q96E52 524 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 TSPAN32Q96QS1 320 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 SNX18Q96RF0 628 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 MARVELD1Q9BSK0 173 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 OR2B2Q9GZK3 357 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 VN1R1Q9GZP7 353 aa12.85□□□□□ -0.35
NCLP1-201ENST00000445357 ZNF768Q9H5H4 540 aaKnown RBP12.85□□□□□ -0.35
NCLP1-201ENST00000445357 ZNF879B4DU55 563 aa12.84□□□□□ -0.35
NCLP1-201ENST00000445357 NDUFB5O43674 189 aa12.84□□□□□ -0.35
NCLP1-201ENST00000445357 FZD7O75084 574 aa12.84□□□□□ -0.35
NCLP1-201ENST00000445357 SLC43A1O75387 559 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms