RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 MINDY2Q8NBR6 621 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 GALNT6Q8NCL4 622 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 OR5J2Q8NH18 312 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 SNX18Q96RF0 628 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 TMED9Q9BVK6 235 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 KCNN2Q9H2S1 579 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 IGHV1-45A0A0A0MS14 117 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 ETV2O00321 342 aaPredicted RBP17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 TFP02787 698 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 UMODP07911 640 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 PRKCAP17252 672 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 MAP2K6P52564 334 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 SPANXN2Q5MJ10 180 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 FAM69BQ5VUD6 431 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 FAM199XQ6PEV8 388 aaPredicted RBP17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 MARCH9Q86YJ5 346 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 OR2Y1Q8NGV0 311 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 AP3S1Q92572 193 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 C4orf36Q96KX1 117 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 CEP19Q96LK0 163 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 WDFY2Q96P53 400 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 TSPAN32Q96QS1 320 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 KCNS3Q9BQ31 491 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 STRADBQ9C0K7 418 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 KLRF1Q9NZS2 232 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 ZMIZ1Q9ULJ6 1067 aa17.09■□□□□ 0.33
SEMA3D-202ENST00000444867 CPAMD8Q8IZJ3 1885 aa17.08■□□□□ 0.33
SEMA3D-202ENST00000444867 LNP1A1A4G5 178 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 LOC110117498-PIK3R3F6TDL0 507 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 J3QLW9 94 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 KLF7O75840 302 aaPredicted RBP17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 OR2J2O76002 312 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 RENP00797 406 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 F13BP05160 661 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 ZNF19P17023 458 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 F8A1P23610 371 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 SDC2P34741 201 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 MFSD13AQ14CX5 517 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 ZNF181Q2M3W8 571 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 BTBD16Q32M84 506 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 CDONQ4KMG0 1287 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 DCAF12Q5T6F0 453 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 LINC01590Q5TEZ4 76 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 DCDC5Q6ZRR9 648 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 EGFL6Q8IUX8 553 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 M1APQ8TC57 530 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 ZPLD1Q8TCW7 415 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 COX4I2Q96KJ9 171 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 IMMP1LQ96LU5 166 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 ZPBPQ9BS86 351 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 ALG12Q9BV10 488 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 RERGLQ9H628 205 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 INIPQ9NRY2 104 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 TAS2R5Q9NYW4 299 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 PPP4R1LQ9P1A2 415 aa17.08■□□□□ 0.32
SEMA3D-202ENST00000444867 ISPDA4D126 451 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 LRRTM2O43300 516 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 UPK1BO75841 260 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 DXOO77932 396 aaKnown RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 DKK1O94907 266 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 COX6A1P12074 109 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 MXD1Q05195 221 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 HNRNPA0Q13151 305 aaKnown RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 SLC25A53Q5H9E4 307 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 CENPSQ8N2Z9 138 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 PARP16Q8N5Y8 322 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 OR51L1Q8NGJ5 315 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 OR2T4Q8NH00 348 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 SPACA9Q96E40 222 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 RASL10BQ96S79 203 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 HDHD5Q9BXW7 423 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 MROQ9BYG7 248 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 METTL7AQ9H8H3 244 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 RPRD1BQ9NQG5 326 aaKnown RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 TBCCD1Q9NVR7 557 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 MRPL39Q9NYK5 338 aaKnown RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 UGT2A1Q9Y4X1 527 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 SIRT4Q9Y6E7 314 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 ZNF318Q5VUA4 2279 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 A0A1W2PQ72 361 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 SLC35F4A4IF30 521 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 CTDSP2O14595 271 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 TP53I11O14683 189 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 ZNF208O43345 1280 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 TRIM3O75382 744 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 IGHMP01871 453 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 CD1AP06126 327 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 NAA10P41227 235 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 FOLR3P41439 243 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 GBX2P52951 348 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 OR12D2P58182 307 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 DBPQ10586 325 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 MESTQ5EB52 335 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 C1QL3Q5VWW1 255 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 DMKNQ6E0U4 476 aaPredicted RBP17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 OR6K6Q8NGW6 343 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 NEIL3Q8TAT5 605 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 ZNRF4Q8WWF5 429 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 PMEPA1Q969W9 287 aa17.07■□□□□ 0.32
SEMA3D-202ENST00000444867 SLC25A36Q96CQ1 311 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms