RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 ZNF322Q6U7Q0 402 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TMIGD1Q6UXZ0 262 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PRSS45Q7RTY3 260 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 NPAS4Q8IUM7 802 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF619Q8N2I2 560 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CCDC71LQ8N9Z2 235 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR51L1Q8NGJ5 315 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR51S1Q8NGJ8 323 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 NUDCD2Q8WVJ2 157 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SMIM12Q96EX1 92 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF426Q9BUY5 554 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 DDA1Q9BW61 102 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CERS4Q9HA82 394 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 C1orf123Q9NWV4 160 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PITPNC1Q9UKF7 332 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MEIS3P1A6NDR6 274 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GJE1A6NN92 205 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MFNGO00587 321 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 UGDHO60701 494 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GPR37L1O60883 481 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 NDUFB6O95139 128 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PAPLNO95428 1278 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SERPINA7P05543 415 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GP1BAP07359 652 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MTHFD2P13995 350 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GPX2P18283 190 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 AKT2P31751 481 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CD68P34810 354 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 GPR1P46091 355 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 P2RY4P51582 365 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SLC7A9P82251 487 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SSBP1Q04837 148 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TSPAN31Q12999 210 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 HFEQ30201 348 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CTXN3Q4LDR2 81 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PODNL1Q6PEZ8 512 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 DYRK2Q92630 601 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 LRIG1Q96JA1 1093 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SAMD8Q96LT4 415 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ABHD16BQ9H3Z7 469 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PRDM7Q9NQW5 492 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 EPHA6Q9UF33 1036 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF281Q9Y2X9 895 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 NPIPB9F8W1W9 429 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MSCO60682 206 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 KLF8O95600 359 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR12D1P0DN82 309 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CD82P27701 267 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SELENOPP49908 381 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 EIF2B1Q14232 305 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SSX1Q16384 188 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SYT14P1Q58G82 188 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MS4A13Q5J8X5 152 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 HLA-DQA1Q5Y7H0 255 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PRR27Q6MZM9 219 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 RANBP10Q6VN20 620 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR56B2PQ8NGI1 322 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR5M1Q8NGP8 315 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR13C9Q8NGT0 318 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OR6N2Q8NGY6 317 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF563Q8TA94 476 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 OIT3Q8WWZ8 545 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 FAM122AQ96E09 287 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SLC25A44Q96H78 314 aaPredicted RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PDLIM5Q96HC4 596 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 SCLYQ96I15 445 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CCDC3Q9BQI4 270 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 CWH43Q9H720 699 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 RYDENQ9NUL5 291 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 KCNG2Q9UJ96 466 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 MRPS33Q9Y291 106 aaKnown RBP4.79□□□□□ -1.64
SCN11A-202ENST00000444237 PCDHGC4Q9Y5F7 938 aa4.79□□□□□ -1.64
SCN11A-202ENST00000444237 TRBV4-1A0A0J9YWV2 114 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ANKRD61A6NGH8 418 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CASTOR2A6NHX0 329 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 DNASE2O00115 360 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SAP18O00422 153 aaKnown RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 NME2P1O60361 137 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GCGP01275 180 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ZNF888P0CJ79 500 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 OR10J1P30954 320 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 CLDN6P56747 220 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 MFGE8Q08431 387 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SKP2Q13309 424 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 PIN1Q13526 163 aaPredicted RBP4.78□□□□□ -1.64
SCN11A-202ENST00000444237 PTPRCAPQ14761 206 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 ADIRFQ15847 76 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 Q5BKY6 102 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 SPIN3Q5JUX0 258 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 RIPPLY2Q5TAB7 128 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 LCN10Q6JVE6 187 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GRINAQ7Z429 371 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 C6orf120Q7Z4R8 191 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 NRMQ8IXM6 262 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 MTURNQ8N3F0 131 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 L3MBTL4Q8NA19 623 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GRHL3Q8TE85 626 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 GHSRQ92847 366 aa4.78□□□□□ -1.64
SCN11A-202ENST00000444237 DTD2Q96FN9 168 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms