RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 MAKP20794 623 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 SELENOPP49908 381 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 MNAT1P51948 309 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 FOXD4Q12950 439 aaPredicted RBP11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 SEC23BQ15437 767 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 SPATS1Q496A3 300 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 TSPO2Q5TGU0 170 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 ANKRD34AQ69YU3 496 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 TBPL2Q6SJ96 375 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 GALNT5Q7Z7M9 940 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 TMEM239Q8WW34 195 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 PYURFQ96I23 114 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 WFIKKN1Q96NZ8 548 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 NAA11Q9BSU3 229 aaPredicted RBP11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 SF3B5Q9BWJ5 86 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 FANCFQ9NPI8 374 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 VNN3Q9NY84 501 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 MRPL39Q9NYK5 338 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 MALT1Q9UDY8 824 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 RPS6KA6Q9UK32 745 aa11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 PRPF19Q9UMS4 504 aaKnown RBP11.34□□□□□ -0.59
PDLIM2-212ENST00000443561 CSMD1Q96PZ7 3565 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 TRBV4-1A0A0J9YWV2 114 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 DEFB108AA8MXU0 73 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 OR2T1O43869 369 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 OR7A10O76100 309 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 ADAP00813 363 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 MT-ND1P03886 318 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 THRBP10828 461 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 ZNF26P17031 533 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 RBM34P42696 430 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 MAGEA2P43356 314 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 PHYHD1Q5SRE7 291 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 TTC33Q6PID6 262 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 CASP12Q6UXS9 341 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 Q6ZT83 130 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 FKBP9P1Q75LS8 142 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 H1FNTQ75WM6 255 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 TMEM123Q8N131 208 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 SLC7A13Q8TCU3 470 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 LIPHQ8WWY8 451 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 LZICQ8WZA0 190 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 C14orf79Q96F83 325 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 TXNDC15Q96J42 360 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 NSMCE2Q96MF7 247 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 TACO1Q9BSH4 297 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 THTPAQ9BU02 230 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 SLC19A3Q9BZV2 496 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 FKRPQ9H9S5 495 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 NMNAT1Q9HAN9 279 aaPredicted RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 ELOVL5Q9NYP7 299 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 EMC3Q9P0I2 261 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 SAMD4AQ9UPU9 718 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 RASD1Q9Y272 281 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 NOSIPQ9Y314 301 aaKnown RBP11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 POLQO75417 2590 aa11.33□□□□□ -0.6
PDLIM2-212ENST00000443561 TACC2O95359 2948 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 LOC102725191A0A1B0GVB3 256 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 SH3D21A4FU49 640 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 CDC42EP2O14613 210 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 GPR171O14626 319 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 UPK3AO75631 287 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 LYZL6O75951 148 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 MT-ATP6P00846 226 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 IGF2P01344 180 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 KIR2DL3P43628 341 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 LIMS1P48059 325 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 TRIM25Q14258 630 aaKnown RBP11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 SFRP5Q5T4F7 317 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 BEND4Q6ZU67 534 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 GPAT4Q86UL3 456 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 ARHGAP24Q8N264 748 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 ZNF433Q8N7K0 673 aaPredicted RBP11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 SCAIQ8N9R8 606 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 LRRC75AQ8NAA5 344 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 OR5J2Q8NH18 312 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 MOSPD2Q8NHP6 518 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 CCDC124Q96CT7 223 aaKnown RBP11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 ZNF837Q96EG3 531 aaPredicted RBP11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 OXGR1Q96P68 337 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 EPYCQ99645 322 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 GPA33Q99795 319 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 KLHL4Q9C0H6 718 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 NELFAQ9H3P2 528 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 MED29Q9NX70 200 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 SELENONQ9NZV5 590 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 KCNN3Q9UGI6 736 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 B3GALT5Q9Y2C3 310 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 CORINQ9Y5Q5 1042 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 LRBAP50851 2863 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 CADP27708 2225 aa11.32□□□□□ -0.6
PDLIM2-212ENST00000443561 AKAP6Q13023 2319 aa11.31□□□□□ -0.6
PDLIM2-212ENST00000443561 AKAP9Q99996 3911 aa11.31□□□□□ -0.6
PDLIM2-212ENST00000443561 C16orf97H3BN30 126 aa11.31□□□□□ -0.6
PDLIM2-212ENST00000443561 KLF4O43474 513 aa11.31□□□□□ -0.6
PDLIM2-212ENST00000443561 CLDN17P56750 224 aa11.31□□□□□ -0.6
PDLIM2-212ENST00000443561 FXYD6P3P58550 94 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms