RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 SOX14O95416 240 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 IL2RAP01589 272 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 TMIGD3P0DMS9 266 aaPredicted RBP12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 SLC9A3P48764 834 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 P2RY4P51582 365 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 H3F3AP84243 136 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 RPL18Q07020 188 aaKnown RBP12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 C1DQ13901 141 aaKnown RBP12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 RNPS1Q15287 305 aaKnown RBP12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 ANKRD34AQ69YU3 496 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 OR2A2Q6IF42 318 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 ZNF770Q6IQ21 691 aaPredicted RBP12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 C1orf94Q6P1W5 598 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 EPHX4Q8IUS5 362 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 UEVLDQ8IX04 471 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 SLC43A2Q8N370 569 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 ADPRHL1Q8NDY3 354 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 OR9K2Q8NGE7 335 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 INTS12Q96CB8 462 aaKnown RBP12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 TNFRSF13CQ96RJ3 184 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 CIB1Q99828 191 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 VKORC1Q9BQB6 163 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 ZNF556Q9HAH1 456 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 IL20RAQ9UHF4 553 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 RASD1Q9Y272 281 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 B3GALT5Q9Y2C3 310 aa12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 PRRC2CQ9Y520 2896 aaKnown RBP12.09□□□□□ -0.47
TM9SF4-204ENST00000442842 A0A1B0GUH1 482 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF716A6NP11 495 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 KLF4O43474 513 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 SS18L1O75177 396 aaPredicted RBP12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TOXO94900 526 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 HPRP00739 348 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 ADAP00813 363 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 F13BP05160 661 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 HLA-DOBP13765 273 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 PLA2G2AP14555 144 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF43P17038 809 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 AGTR1P30556 359 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 UQCRC1P31930 480 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 RPL4P36578 427 aaKnown RBP12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 GSSP48637 474 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 RPS4XP62701 263 aaKnown RBP12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TOP3AQ13472 1001 aaPredicted RBP12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 MELKQ14680 651 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TAF11Q15544 211 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TRIP10Q15642 601 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 ZBED5Q49AG3 693 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 C4orf17Q53FE4 359 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 ALG10Q5BKT4 473 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TMEM201Q5SNT2 666 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 RIPPLY2Q5TAB7 128 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 GTF2IRD2BQ6EKJ0 949 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TMEM211Q6ICI0 200 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 GTF2IRD2Q86UP8 949 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TUSC5Q8IXB3 177 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 NAXEQ8NCW5 288 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 RND1Q92730 232 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 NRBF2Q96F24 287 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 CCDC120Q96HB5 630 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 GMPPAQ96IJ6 420 aaPredicted RBP12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 DMRTA2Q96SC8 542 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 DGCR6LQ9BY27 220 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 UCK2Q9BZX2 261 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 NDEL1Q9GZM8 345 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 GABARAPL1Q9H0R8 117 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 EGLN3Q9H6Z9 239 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 C12orf49Q9H741 205 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 SMURF2Q9HAU4 748 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 MCCC2Q9HCC0 563 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 TBC1D23Q9NUY8 699 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 EMC3Q9P0I2 261 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 HIF3AQ9Y2N7 669 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 EMC9Q9Y3B6 208 aa12.08□□□□□ -0.48
TM9SF4-204ENST00000442842 A0A0G2JNJ9 132 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 MS4A18H0YCH9 400 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 EI24O14681 340 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 VAMP5O95183 116 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 RCBTB2O95199 551 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 ANXA8P13928 327 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 IGFBP5P24593 272 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 TIMP3P35625 211 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 FOXF2Q12947 444 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 SLC17A1Q14916 467 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 MS4A18Q3C1V0 323 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 SMARCD3Q6STE5 483 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 CASP12Q6UXS9 341 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF620Q6ZNG0 422 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 GALNT5Q7Z7M9 940 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 CCDC71Q8IV32 467 aaPredicted RBP12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 LIPHQ8WWY8 451 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 EME1Q96AY2 570 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 ZNF385AQ96PM9 386 aaKnown RBP12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 SF3B5Q9BWJ5 86 aaKnown RBP12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 OR52D1Q9H346 318 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 DCLRE1BQ9H816 532 aa12.07□□□□□ -0.48
TM9SF4-204ENST00000442842 INIPQ9NRY2 104 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms