RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 FAM69AQ5T7M9 428 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 CYB5R2Q6BCY4 276 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 ANKRD16Q6P6B7 361 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 EPGNQ6UW88 154 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 MAVSQ7Z434 540 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 GPR137CQ8N3F9 429 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 SPATA3Q8NHX4 192 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 NFKBIDQ8NI38 313 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 DNAJA4Q8WW22 397 aaPredicted RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 DYDC1Q8WWB3 177 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 PROX1Q92786 737 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 MAL2Q969L2 176 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 TLCD1Q96CP7 247 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 BOD1Q96IK1 185 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 ZNF607Q96SK3 696 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 VRK1Q99986 396 aaPredicted RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 LINC00470Q9BZP3 86 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 C12orf10Q9HB07 376 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 MYOZ1Q9NP98 299 aaPredicted RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 LPAR3Q9UBY5 353 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 FBXO9Q9UK97 447 aaPredicted RBP10.28□□□□□ -0.76
TTC28-203ENST00000442232 ARFGEF3Q5TH69 2177 aa10.28□□□□□ -0.76
TTC28-203ENST00000442232 A0A096LPE4 126 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 A0A1W2PPZ6 126 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 PRORSD1PA6NEY8 169 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 RNF212BA8MTL3 300 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 EVPLLA8MZ36 301 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 B9A039 149 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 NDUFS8O00217 210 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 GPRIN2O60269 458 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 NPIPB7O75200 414 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 TGDSO95455 350 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 F12P00748 615 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 NUDT7P0C024 238 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 ARAFP10398 606 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 BMP2P12643 396 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 NQO1P15559 274 aaKnown RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 USF1P22415 310 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 CAPZA2P47755 286 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 P2RY4P51582 365 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 RGS8P57771 180 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 MFSD13AQ14CX5 517 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 C3orf36Q3SXR2 165 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 ALG10BQ5I7T1 473 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 REEP3Q6NUK4 255 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 VHLLQ6RSH7 139 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 RANBP3LQ86VV4 465 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 LSRQ86X29 649 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 EPHX4Q8IUS5 362 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 PIK3C3Q8NEB9 887 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 BHLHE22Q8NFJ8 381 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 OR4F15Q8NGB8 312 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 MAGEE2Q8TD90 523 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 BCL2L2Q92843 193 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 SPDL1Q96EA4 605 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 KTI12Q96EK9 354 aaPredicted RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 C7orf26Q96N11 449 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 OXGR1Q96P68 337 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 EPYCQ99645 322 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 REPIN1Q9BWE0 567 aaKnown RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 ASPNQ9BXN1 380 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 BEX2Q9BXY8 128 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 B3GAT2Q9NPZ5 323 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 CA10Q9NS85 328 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 CCDC167Q9P0B6 97 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 TESQ9UGI8 421 aaKnown RBP10.27□□□□□ -0.77
TTC28-203ENST00000442232 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
TTC28-203ENST00000442232 YLPM1P49750 1951 aaKnown RBP10.26□□□□□ -0.77
TTC28-203ENST00000442232 TRAV36DV7A0A075B6V5 113 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 A0A1B0GWA3 101 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 M0R082 166 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 UPK3AO75631 287 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 PDE5AO76074 875 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 VIMP08670 466 aaKnown RBP10.26□□□□□ -0.77
TTC28-203ENST00000442232 ZNF16P17020 682 aaPredicted RBP10.26□□□□□ -0.77
TTC28-203ENST00000442232 SLC6A2P23975 617 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 SERPINF1P36955 418 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 MRPL19P49406 292 aaKnown RBP10.26□□□□□ -0.77
TTC28-203ENST00000442232 GZMKP49863 264 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 TUBA1BP68363 451 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 TUBA4AP68366 448 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 CDK6Q00534 326 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 NAAAQ02083 359 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 LGALS3BPQ08380 585 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 GGTLC2Q14390 218 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 LRIF1Q5T3J3 769 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 AGBL2Q5U5Z8 902 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 FAM91A1Q658Y4 838 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 ULK3Q6PHR2 472 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 DHRS4L2Q6PKH6 230 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 C6orf89Q6UWU4 347 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 TUBA1AQ71U36 451 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 H1FNTQ75WM6 255 aaPredicted RBP10.26□□□□□ -0.77
TTC28-203ENST00000442232 NET1Q7Z628 596 aaPredicted RBP10.26□□□□□ -0.77
TTC28-203ENST00000442232 SNX32Q86XE0 403 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 UEVLDQ8IX04 471 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 KDM8Q8N371 416 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms