RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 TRAV36DV7A0A075B6V5 113 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 LOC102725191A0A1B0GVB3 256 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 E7EQL1 145 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 M0R082 166 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 UPK3AO75631 287 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 C8BP07358 591 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 GRPRP30550 384 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 CDKN1AP38936 164 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 CDH11P55287 796 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 NPTX1Q15818 432 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 NRF1Q16656 503 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 CYP51A1Q16850 503 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 NIPAL3Q6P499 406 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 LINC00114Q6XXX2 140 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 B3GLCTQ6Y288 498 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 OR6S1Q8NH40 331 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 OR10A6Q8NH74 314 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 ZNF417Q8TAU3 575 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 SLC41A3Q96GZ6 507 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 ZNF587Q96SQ5 575 aaPredicted RBP16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 C1QTNF6Q9BXI9 259 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 LINC00470Q9BZP3 86 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 TMEM27Q9HBJ8 222 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 B3GALT5Q9Y2C3 310 aa16.56■□□□□ 0.24
HMGB3P22-201ENST00000442010 OR6C65A6NJZ3 312 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 MS4A18H0YCH9 400 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 M0R1B8 84 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 FXYD1O00168 92 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 AIM2O14862 343 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 FMO6PO60774 539 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 BGLAPP02818 100 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 OPN1SWP03999 348 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 PCGF2P35227 344 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 CRYBA2P53672 197 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 CDH12P55289 794 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 CLDN17P56750 224 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 TRMT5Q32P41 509 aaKnown RBP16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 MS4A18Q3C1V0 323 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 KRTAP21-3Q3LHN1 58 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 NANOGP8Q6NSW7 305 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 H1FNTQ75WM6 255 aaPredicted RBP16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 ABHD12BQ7Z5M8 362 aaPredicted RBP16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 ADPRHL1Q8NDY3 354 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 OR4D11Q8NGI4 311 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 OR1K1Q8NGR3 316 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 ALKBH3Q96Q83 286 aaPredicted RBP16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 NELFAQ9H3P2 528 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 NANOGQ9H9S0 305 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 RCE1Q9Y256 329 aa16.55■□□□□ 0.24
HMGB3P22-201ENST00000442010 ZNF587BE7ETH6 402 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 RPL36A-HNRNPH2H7BZ11 118 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 M0R3H8 397 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 LY6G6DO95868 133 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 HEXAP06865 529 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 ZNF43P17038 809 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 CD247P20963 164 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 GTF2E2P29084 291 aaKnown RBP16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 ARFIP2P53365 341 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 PRPS1P60891 318 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 NCALDP61601 193 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 HIKESHIQ53FT3 197 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 COQ5Q5HYK3 327 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 SWT1Q5T5J6 900 aaKnown RBP16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 C11orf71Q6IPW1 123 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 ZNF613Q6PF04 617 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 CLEC9AQ6UXN8 241 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 NHLRC1Q6VVB1 395 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 Q71RC1 249 aaPredicted RBP16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 RANBP3LQ86VV4 465 aaPredicted RBP16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 CALHM3Q86XJ0 350 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 SLC30A8Q8IWU4 369 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 OR6T1Q8NGN1 323 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 TAMM41Q96BW9 452 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 TRMT61AQ96FX7 289 aaKnown RBP16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 MCHR1Q99705 422 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 DHRS9Q9BPW9 319 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 TMEM43Q9BTV4 400 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 CCDC134Q9H6E4 229 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 OBP2BQ9NPH6 170 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 SAR1AQ9NR31 198 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 SLC13A4Q9UKG4 626 aa16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 YLPM1P49750 1951 aaKnown RBP16.54■□□□□ 0.24
HMGB3P22-201ENST00000442010 ABCA1O95477 2261 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 TRAF3IP2O43734 574 aaPredicted RBP16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 LYPD3O95274 346 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 HPRP00739 348 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 THY1P04216 161 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 TROVE2P10155 538 aaKnown RBP eCLIP16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 CDH2P19022 906 aaPredicted RBP16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 TTKP33981 857 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 KLF10Q13118 480 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 MFSD13AQ14CX5 517 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 VMACQ2NL98 169 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 TBRG1Q3YBR2 411 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 SLC22A25Q6T423 547 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 DNM1P46Q6ZS02 220 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 CCDC80Q76M96 950 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 PATL1Q86TB9 770 aaKnown RBP16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 TSPYL5Q86VY4 417 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms