RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ACOXLQ9NUZ1 547 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SMOXQ9NWM0 555 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SIDT1Q9NXL6 827 aaKnown RBP9.61□□□□□ -0.87
SYNE2-206ENST00000441438 OSGIN2Q9Y236 505 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYNE2-206ENST00000441438 LOXHD1Q8IVV2 1947 aa9.61□□□□□ -0.87
SYNE2-206ENST00000441438 LOC105369274A0A096LPK9 316 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 LOC102723532A0A0G2JNH3 316 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 LDB2O43679 373 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 KHDRBS3O75525 346 aaKnown RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 TSPAN12O95859 305 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 GCAP28676 217 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 PCSK6P29122 969 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 ATP6V1FQ16864 119 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 ZNF630Q2M218 657 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 MGAT5BQ3V5L5 792 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 DCAF10Q5QP82 559 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 OR4N4Q8N0Y3 316 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 PROKR1Q8TCW9 393 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 ZNF382Q96SR6 550 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 MIEF1Q9NQG6 463 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 FARSAQ9Y285 508 aaKnown RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 TCRBV7S2A1N4TA0A589 114 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 XPNPEP2O43895 674 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 LATS1O95835 1130 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 ETFAP13804 333 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 ZNF250P15622 560 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 IL7RP16871 459 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 GABRR2P28476 465 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 GNRHRP30968 328 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 RPS19P39019 145 aaKnown RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 DUSP3P51452 185 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 PTTG1IPP53801 180 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 EEFSECP57772 596 aaKnown RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 RPL32P62910 135 aaKnown RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 TLE4Q04727 773 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 IKZF1Q13422 519 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 FAM182AQ5T1J6 154 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 IDNKQ5T6J7 187 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 PLET1Q6UQ28 207 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 OR4Q3Q8NH05 313 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 MAPK15Q8TD08 544 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 RNASEH2CQ8TDP1 164 aaKnown RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 GPR151Q8TDV0 419 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 TMEM203Q969S6 136 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 FKBP10Q96AY3 582 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 SLC38A3Q99624 504 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 GCM1Q9NP62 436 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 NDRG4Q9ULP0 352 aaKnown RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 HEMK1Q9Y5R4 338 aaPredicted RBP9.6□□□□□ -0.87
SYNE2-206ENST00000441438 NFASCO94856 1347 aa9.6□□□□□ -0.87
SYNE2-206ENST00000441438 PRSS29PA6NIE9 313 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 PPP1R2P9O14990 202 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 GYG2O15488 501 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 OIP5O43482 229 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 GAPDHP04406 335 aaKnown RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 S100A11P31949 105 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 INSM1Q01101 510 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 PTGES3Q15185 160 aaKnown RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 PSMD5Q16401 504 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 HSD17B12Q53GQ0 312 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 FAM214BQ7L5A3 538 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 ZNF720Q7Z2F6 126 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 ZBTB8OSQ8IWT0 167 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 OR11H1Q8NG94 326 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 OR2T11Q8NH01 316 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 OR11H2Q8NH07 326 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 MUS81Q96NY9 551 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 MYADMQ96S97 322 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 SLC25A32Q9H2D1 315 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 UBE2ZQ9H832 354 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 SLCO1B3Q9NPD5 702 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 RAB26Q9ULW5 256 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 RAD1O60671 282 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 BANF1O75531 89 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 C2P06681 752 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 KRT33BQ14525 404 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 UGCGQ16739 394 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 TRMT5Q32P41 509 aaKnown RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 MBLAC2Q68D91 279 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 ADGRG3Q86Y34 549 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 STHQ8IWL8 128 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 DAW1Q8N136 415 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 PELI3Q8N2H9 469 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 ZFP28Q8NHY6 868 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 TMEM174Q8WUU8 243 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 VSTM2LQ96N03 204 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 THAP7Q9BT49 309 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 NDUFAF3Q9BU61 184 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 BARX1Q9HBU1 254 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 ZNF334Q9HCZ1 680 aaPredicted RBP9.59□□□□□ -0.87
SYNE2-206ENST00000441438 GABRA1P14867 456 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 CDC42P60953 191 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 RAP1AP62834 184 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 C9orf135Q5VTT2 229 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 VASNQ6EMK4 673 aa9.59□□□□□ -0.87
SYNE2-206ENST00000441438 FAM159AQ6UWV7 190 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms