RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 C15orf40Q8WUR7 153 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 RAB40AQ8WXH6 277 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 TFGQ92734 400 aaPredicted RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 OR7D2Q96RA2 312 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 CD180Q99467 661 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 PHF7Q9BWX1 381 aaPredicted RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 DPH1Q9BZG8 443 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 ENKD1Q9H0I2 346 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 GAREM1Q9H706 876 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 SIDT1Q9NXL6 827 aaKnown RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 ANKRD10Q9NXR5 420 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 SLC7A7Q9UM01 511 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 RFPL4AA6NLU0 287 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 IFITM5A6NNB3 132 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 ZNF879B4DU55 563 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 C2CD4DB7Z1M9 353 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 RFPL4AL1F8VTS6 287 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 NARSO43776 548 aaKnown RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 FMO6PO60774 539 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 CLEC3AO75596 197 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 GP1BAP07359 652 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 SRMP19623 302 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 COL9A1P20849 921 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 RFC3P40938 356 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 POU4F2Q12837 409 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 ILF3Q12906 894 aaKnown RBP eCLIP10.92□□□□□ -0.66
LTBR-203ENST00000441074 CBFBQ13951 182 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 RBMS2Q15434 407 aaKnown RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 ZNF528Q3MIS6 628 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 TMEM35AQ53FP2 167 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 IGSF11Q5DX21 431 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 TMEM196Q5HYL7 178 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 TMEM69Q5SWH9 247 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 AGBL4Q5VU57 503 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 DCAF12L2Q5VW00 463 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 HAGHLQ6PII5 290 aaPredicted RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 TSSK4Q6SA08 328 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 SSX6Q7RTT6 188 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 C11orf96Q7Z7L8 435 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 AMZ2Q86W34 360 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 C2orf73Q8N5S3 287 aaPredicted RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 AMER3Q8N944 861 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 OR14A2Q96R54 314 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 GFI1Q99684 422 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 PIGMQ9H3S5 423 aa10.92□□□□□ -0.66
LTBR-203ENST00000441074 ZNF768Q9H5H4 540 aaKnown RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 ZNF223Q9UK11 482 aaPredicted RBP10.92□□□□□ -0.66
LTBR-203ENST00000441074 A0A0D9SG52 128 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 FAM25EA8MYX2 175 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 DISC1C4P0D8 188 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 MAN2B1O00754 1011 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 RCBTB2O95199 551 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 IFNA4P05014 189 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 CTHP32929 405 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 SSR2P43308 183 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 STARP49675 285 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 SIRPAP78324 504 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 FGL2Q14314 439 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 TP53I3Q53FA7 332 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 ELP2Q6IA86 826 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 RPL13AP3Q6NVV1 102 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 DNM1P46Q6ZS02 220 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 LRRTM4Q86VH4 590 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 SVBPQ8N300 66 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 RAB42Q8N4Z0 105 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 PEX11GQ96HA9 241 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 NARS2Q96I59 477 aaKnown RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 TSNAXQ99598 290 aaKnown RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 MRI1Q9BV20 369 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 CACYBPQ9HB71 228 aaKnown RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 SLC35A3Q9Y2D2 325 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 PVALBP20472 110 aaPredicted RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 MAKP20794 623 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 NOS3P29474 1203 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 PTGER1P34995 402 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 FAUP35544 74 aaKnown RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 SORDQ00796 357 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 TSC22D1Q15714 1073 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 RPL22L1Q6P5R6 122 aaKnown RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 LDLRAD3Q86YD5 345 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 SYS1Q8N2H4 156 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 MUC20Q8N307 709 aaPredicted RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 TMEM185AQ8NFB2 350 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 SYNPRQ8TBG9 265 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 HAVCR1Q96D42 359 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 PELI1Q96FA3 418 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 RSPH9Q9H1X1 276 aaPredicted RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 NOX4Q9NPH5 578 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 SLC23A2Q9UGH3 650 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 NOSIPQ9Y314 301 aaKnown RBP10.91□□□□□ -0.66
LTBR-203ENST00000441074 PIAS3Q9Y6X2 628 aa10.91□□□□□ -0.66
LTBR-203ENST00000441074 FEZF1A0PJY2 475 aa10.9□□□□□ -0.66
LTBR-203ENST00000441074 RAB19A4D1S5 217 aa10.9□□□□□ -0.66
LTBR-203ENST00000441074 RIIAD1A6NNX1 92 aa10.9□□□□□ -0.66
LTBR-203ENST00000441074 C1QTNF3-AMACRE9PGA6 284 aa10.9□□□□□ -0.66
LTBR-203ENST00000441074 EMC8O43402 210 aa10.9□□□□□ -0.66
LTBR-203ENST00000441074 OR1F1O43749 312 aa10.9□□□□□ -0.66
LTBR-203ENST00000441074 FUT1P19526 365 aa10.9□□□□□ -0.66
LTBR-203ENST00000441074 PTNP21246 168 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms