RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ATP23Q9Y6H3 246 aa17.42■□□□□ 0.38
SHROOM1-204ENST00000440118 FTCDNL1E5RQL4 147 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 M0R082 166 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 LGI1O95970 557 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 OPN1SWP03999 348 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 PTNP21246 168 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 CBLP22681 906 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 P2RY4P51582 365 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 EGR4Q05215 589 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 RBBP4Q09028 425 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 MFSD13AQ14CX5 517 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 OR1Q1Q15612 314 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 ADRM1Q16186 407 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 CLEC12BQ2HXU8 276 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 MMEL1Q495T6 779 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 HIKESHIQ53FT3 197 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 METTL21CQ5VZV1 264 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 RETREG3Q86VR2 466 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 SLC30A8Q8IWU4 369 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 FBXL14Q8N1E6 418 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 ZNF417Q8TAU3 575 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 TSPEARQ8WU66 669 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 ZNF587Q96SQ5 575 aaPredicted RBP17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 TRAF4Q9BUZ4 470 aaPredicted RBP17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 ASPNQ9BXN1 380 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 MRGBPQ9NV56 204 aa17.41■□□□□ 0.38
SHROOM1-204ENST00000440118 M0R3H8 397 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 SLC43A1O75387 559 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 VIMP08670 466 aaKnown RBP17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 GRPRP30550 384 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 FABP6P51161 128 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 LGALS3BPQ08380 585 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 DMTNQ08495 405 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 SF3A3Q12874 501 aaKnown RBP eCLIP17.4■□□□□ 0.382e-6■■□□□ 12.5
SHROOM1-204ENST00000440118 SELPLGQ14242 412 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 INTS11Q5TA45 600 aaKnown RBP17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 NET1Q7Z628 596 aaPredicted RBP17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 EPHX4Q8IUS5 362 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 GPR137CQ8N3F9 429 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 WDR31Q8NA23 367 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 TAAR8Q969N4 342 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 ADAD1Q96M93 576 aaKnown RBP17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 OXGR1Q96P68 337 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 DHRS9Q9BPW9 319 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 BARX1Q9HBU1 254 aaPredicted RBP17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 SEC14L4Q9UDX3 406 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 RCE1Q9Y256 329 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 B3GALT5Q9Y2C3 310 aa17.4■□□□□ 0.38
SHROOM1-204ENST00000440118 A0A0B4J2E0 115 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 A0A1B0GX12 115 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 OVOL3O00110 214 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 MFN2O95140 757 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 LY6G6DO95868 133 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 SLC25A3Q00325 362 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 CYLC2Q14093 348 aaPredicted RBP17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 TBRG1Q3YBR2 411 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 HSP90B2PQ58FF3 399 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 C1QTNF12Q5T7M4 302 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 H1FNTQ75WM6 255 aaPredicted RBP17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 PATL1Q86TB9 770 aaKnown RBP17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 PTOV1Q86YD1 416 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 UEVLDQ8IX04 471 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 MUC15Q8N387 334 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 OR1K1Q8NGR3 316 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 OR10A6Q8NH74 314 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 MCHR1Q99705 422 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 OBP2BQ9NPH6 170 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 FGFR1OP2Q9NVK5 253 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 KLHL14Q9P2G3 628 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 CORINQ9Y5Q5 1042 aa17.39■□□□□ 0.37
SHROOM1-204ENST00000440118 E7EQL1 145 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 UPK3AO75631 287 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 TTKP33981 857 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 PCGF2P35227 344 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 ARFIP2P53365 341 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 SH3BGRP55822 239 aaPredicted RBP17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 ROR2Q01974 943 aaKnown RBP17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 MAPRE2Q15555 327 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 NRF1Q16656 503 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 TRMT5Q32P41 509 aaKnown RBP17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 SWT1Q5T5J6 900 aaKnown RBP17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 DTX2Q86UW9 622 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 VANGL1Q8TAA9 524 aaPredicted RBP17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 CACNG6Q9BXT2 260 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 CBLN4Q9NTU7 201 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 CSPG4Q6UVK1 2322 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 HIVEP2P31629 2446 aa17.38■□□□□ 0.37
SHROOM1-204ENST00000440118 IGKV1D-42A0A075B6H8 117 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 A0A087WUJ7 227 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 A0A096LPE4 126 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 A0A1W2PPZ6 126 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 CPSF4LA6NMK7 179 aaKnown RBP17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 ATP6V1G2-DDX39BF2Z307 99 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 M0QX08 132 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 BMP4P12644 408 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 HOXB4P17483 251 aaPredicted RBP17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 ACVR1BP36896 505 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 NUDT6P53370 316 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 CDH12P55289 794 aa17.37■□□□□ 0.37
SHROOM1-204ENST00000440118 PCBP3P57721 371 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms