RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CAMK2AQ9UQM7 478 aa18.55■□□□□ 0.56
CHD3-204ENST00000439235 A0A1W2PNV4 684 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 BCKDKO14874 412 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 SLC16A6O15403 523 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 SYNGR4O95473 234 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 ENPP1P22413 925 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 AGFG1P52594 562 aaKnown RBP18.54■□□□□ 0.56
CHD3-204ENST00000439235 ADARB1P78563 741 aaKnown RBP18.54■□□□□ 0.56
CHD3-204ENST00000439235 KEAP1Q14145 624 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 GINS1Q14691 196 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 CLEC12AQ5QGZ9 265 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 C6orf52Q5T4I8 152 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 SLX4IPQ5VYV7 408 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 PCSK4Q6UW60 755 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 THSD4Q6ZMP0 1018 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 DPY19L2P2Q6ZN68 376 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 TMEM99Q8N816 258 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 TFAP2CQ92754 450 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 SNRNP40Q96DI7 357 aaKnown RBP18.54■□□□□ 0.56
CHD3-204ENST00000439235 HRASLS5Q96KN8 279 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 IFT27Q9BW83 186 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 TAS2R5Q9NYW4 299 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 MCTS1Q9ULC4 181 aaKnown RBP18.54■□□□□ 0.56
CHD3-204ENST00000439235 RASD1Q9Y272 281 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 GMPPBQ9Y5P6 360 aa18.54■□□□□ 0.56
CHD3-204ENST00000439235 LOC100130705A0A1B0GUX0 176 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 NPIPA2E9PIF3 369 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 NPIPA3F8WFD2 350 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 RNF13O43567 381 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 VAMP5O95183 116 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 AHCYP23526 432 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 EPHA2P29317 976 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 GIPRP48546 466 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 RPS6KA3P51812 740 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 H3F3AP84243 136 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 CDK5Q00535 292 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 HSF1Q00613 529 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 IL18R1Q13478 541 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 PGGHGQ32M88 737 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 LRRC75AQ8NAA5 344 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 ANKK1Q8NFD2 765 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 SLX1AQ9BQ83 275 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 FANCFQ9NPI8 374 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 INIPQ9NRY2 104 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 TNFRSF10DQ9UBN6 386 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 IL20RAQ9UHF4 553 aa18.53■□□□□ 0.56
CHD3-204ENST00000439235 NDRG4Q9ULP0 352 aaKnown RBP18.53■□□□□ 0.56
CHD3-204ENST00000439235 MCIDASD6RGH6 385 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 E9PQ18 207 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 C11orf98E9PRG8 122 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 CD14P08571 375 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 GRK5P34947 590 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 GGT2P36268 569 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 TDGF1P3P51864 188 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 CTXN1P60606 82 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 CDC42P60953 191 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 C3AR1Q16581 482 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 TMEM225Q6GV28 225 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 IGFN1Q86VF2 1251 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 IQCF1Q8N6M8 205 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 ZNF845Q96IR2 970 aaPredicted RBP18.52■□□□□ 0.56
CHD3-204ENST00000439235 APOL4Q9BPW4 351 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 POLDIP3Q9BY77 421 aaKnown RBP18.52■□□□□ 0.56
CHD3-204ENST00000439235 NRIP3Q9NQ35 241 aa18.52■□□□□ 0.56
CHD3-204ENST00000439235 A0A1W2PRG6 482 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 TTLL8A6PVC2 850 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 BHLHE40O14503 412 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 SMAD9O15198 467 aaKnown RBP18.51■□□□□ 0.55
CHD3-204ENST00000439235 WISP2O76076 250 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 PPP1R3DO95685 299 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 HMGN1P05114 100 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 APEHP13798 732 aaKnown RBP18.51■□□□□ 0.55
CHD3-204ENST00000439235 PTGS2P35354 604 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 P2RY4P51582 365 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 SF3B4Q15427 424 aaKnown RBP eCLIP18.51■□□□□ 0.551e-6■■■□□ 17.6
CHD3-204ENST00000439235 PRR30Q53SZ7 412 aaPredicted RBP18.51■□□□□ 0.55
CHD3-204ENST00000439235 TMEM236Q5W0B7 351 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 C12orf73Q69YU5 71 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 ABLIM2Q6H8Q1 611 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 CASP12Q6UXS9 341 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 Q6ZPB1 254 aaPredicted RBP18.51■□□□□ 0.55
CHD3-204ENST00000439235 PXKQ7Z7A4 578 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 UEVLDQ8IX04 471 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 DEPDC4Q8N2C3 294 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 LNX2Q8N448 690 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 SETD9Q8NE22 299 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 OR4Q3Q8NH05 313 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 OXGR1Q96P68 337 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 SLC38A2Q96QD8 506 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 KATNB1Q9BVA0 655 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 ENKD1Q9H0I2 346 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 ASF1BQ9NVP2 202 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 IMPAD1Q9NX62 359 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 ZNF175Q9Y473 711 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 NOX1Q9Y5S8 564 aa18.51■□□□□ 0.55
CHD3-204ENST00000439235 PKD1L2Q7Z442 2459 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 LOC102725191A0A1B0GVB3 256 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 NPIPB13A6NJU9 1138 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 NPIPB4C9JG80 1138 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 MS4A18H0YCH9 400 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms