RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RIDAP52758 137 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 CRYBA2P53672 197 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 C17orf67Q0P5P2 114 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 UEVLDQ8IX04 471 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF283Q8N7M2 679 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR10A4Q9H209 315 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC6A15Q9H2J7 730 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 A0A1B0GVI7 797 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 H7C1C5 153 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 SULT2B1O00204 365 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 TNFRSF10AO00220 468 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 SUSD5O60279 629 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 HPGDSO60760 199 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 GATBO75879 557 aaKnown RBP10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 HTR3AP46098 478 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 LCN6P62502 163 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 TATDN3Q17R31 274 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 CCDC58Q4VC31 144 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 C3orf38Q5JPI3 329 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 GPR139Q6DWJ6 353 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC18B1Q6NT16 456 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF627Q7L945 461 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 FAM26EQ8N5C1 309 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR52I1Q8NGK6 324 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 PITX2Q99697 317 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 BCL2L14Q9BZR8 327 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 RNF121Q9H920 327 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 NPFFR2Q9Y5X5 522 aa10.63□□□□□ -0.71
TRAPPC9-202ENST00000438773 CDHR4A6H8M9 788 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 SCO1O75880 301 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ECDO95905 644 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 FOLR1P15328 257 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 VAMP1P23763 118 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 CCL7P80098 99 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 SLC6A19Q695T7 634 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 TMPRSS12Q86WS5 348 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR2I1PQ8NGU4 316 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR5J2Q8NH18 312 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 CASTOR1Q8WTX7 329 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF350Q9GZX5 532 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 MYEF2Q9P2K5 600 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 B4GALT7Q9UBV7 327 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 DIMT1Q9UNQ2 313 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 FBXO45P0C2W1 286 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 RAB3BP20337 219 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 PRKXP51817 358 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 GALK2Q01415 458 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 POU3F1Q03052 451 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 GLO1Q04760 184 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 FAM205BPQ63HN1 556 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 BTN2A1Q7KYR7 527 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 FTMTQ8N4E7 242 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 THRSPQ92748 146 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 RFT1Q96AA3 541 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF764Q96H86 408 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 WDR77Q9BQA1 342 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 GPN1Q9HCN4 374 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF226Q9NYT6 803 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 KLF15Q9UIH9 416 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 FARSAQ9Y285 508 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ARHGEF17Q96PE2 2063 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ICE1Q9Y2F5 2266 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 GPR179Q6PRD1 2367 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 TMED7-TICAM2A0A0A6YYA0 188 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 G3V3Y1 287 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 TNFSF14O43557 240 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 HOXB9P17482 250 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 TCN2P20062 427 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 CRABP1P29762 137 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 LSSP48449 732 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 RASGEF1BQ0VAM2 473 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 SNTB2Q13425 540 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 OCLNQ16625 522 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 OR4C3Q8NH37 302 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 Q96M85 177 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 SFXN2Q96NB2 322 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 INTS14Q96SY0 518 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 NAA11Q9BSU3 229 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 SAV1Q9H4B6 383 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 HINT3Q9NQE9 182 aaKnown RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 PLCXD1Q9NUJ7 323 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 FBXO34Q9NWN3 711 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 CTSFQ9UBX1 484 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 GPR55Q9Y2T6 319 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 TMED7Q9Y3B3 224 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 KLK4Q9Y5K2 254 aa10.62□□□□□ -0.71
TRAPPC9-202ENST00000438773 ARRDC5A6NEK1 342 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 LYRM1O43325 122 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 RAD1O60671 282 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF432O94892 652 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 CD14P08571 375 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 CT62P0C5K7 136 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 HTR1FP30939 366 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 UGT2B10P36537 528 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF628Q5EBL2 1059 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ZNF322Q6U7Q0 402 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 ARMC10Q8N2F6 343 aa10.61□□□□□ -0.71
TRAPPC9-202ENST00000438773 NEK7Q8TDX7 302 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms