RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 UBQLN3Q9H347 655 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SLC6A20Q9NP91 592 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 ACSS1Q9NUB1 689 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-209ENST00000437951 FBXL12Q9NXK8 326 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 DNAJB11Q9UBS4 358 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 IER3IP1Q9Y5U9 82 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 OXA1LQ15070 435 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SLC14A2Q15849 920 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 LRRC26Q2I0M4 334 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 RPL7L1Q6DKI1 246 aaKnown RBP10.77□□□□□ -0.69
PTCH1-209ENST00000437951 ZBTB44Q8NCP5 570 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 CD99L2Q8TCZ2 262 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 BPIFA2Q96DR5 249 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 C11orf49Q9H6J7 331 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 ACOXLQ9NUZ1 547 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 CSNK1G3Q9Y6M4 447 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 IFT172Q9UG01 1749 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 P04436 131 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SUB1P53999 127 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTCH1-209ENST00000437951 KIAA1024LP59773 190 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 COMMD6Q7Z4G1 85 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 OR1J1Q8NGS3 322 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 OR5B3Q8NH48 314 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 KCNK12Q9HB15 430 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 MED9Q9NWA0 146 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 ADH4P08319 380 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 ACSM4P0C7M7 580 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 FUT1P19526 365 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 TREML2Q5T2D2 321 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 ST8SIA2Q92186 375 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 FAM71F1Q96KD3 344 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-209ENST00000437951 ESRP2Q9H6T0 727 aaKnown RBP10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SPACA1Q9HBV2 294 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 AK3Q9UIJ7 227 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 PLAGL1Q9UM63 463 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 TDRD6O60522 2096 aaKnown RBP10.77□□□□□ -0.69
PTCH1-209ENST00000437951 DCTN6O00399 190 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 NRP1O14786 923 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 C8AP07357 584 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 IL2RGP31785 369 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 TMEM71Q6P5X7 295 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 Q6ZRG5 221 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SLC46A3Q7Z3Q1 461 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 TMEM130Q8N3G9 435 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 CPXM2Q8N436 756 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 CLDN19Q8N6F1 224 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 SCAMP5Q8TAC9 235 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 MAP3K3Q99759 626 aa10.77□□□□□ -0.69
PTCH1-209ENST00000437951 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 LRRC73Q5JTD7 316 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 LGALS14Q8TCE9 139 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 CREB3L4Q8TEY5 395 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 CNIH4Q9P003 139 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 KCTD3Q9Y597 815 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 IGLV3-22A0A075B6J6 115 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 CTDSP2O14595 271 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 IL3RAP26951 378 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 CDKN2DP55273 166 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 TSPAN31Q12999 210 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 OR4D1Q15615 310 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 PRR18Q8N4B5 295 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 GPR119Q8TDV5 335 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 DLG5Q8TDM6 1919 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 IGHG1P01857 330 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 GDI1P31150 447 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 RUNX2Q13950 521 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 AANATQ16613 207 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 NXNL2Q5VZ03 156 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 CELF2-AS1Q8N7Q2 184 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 OR13D1Q8NGV5 346 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 DYNC2LI1Q8TCX1 351 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 ABHD6Q9BV23 337 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 TRABD2BA6NFA1 517 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 FAM227AF5H4B4 570 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 DUSP11O75319 330 aaKnown RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 TACR1P25103 407 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 MRPL19P49406 292 aaKnown RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 TESK1Q15569 626 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 ADPRMQ3LIE5 342 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 RPUSD3Q6P087 351 aaKnown RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 NAGSQ8N159 534 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 ACTR3CQ9C0K3 210 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 IGSF5Q9NSI5 407 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 HRASLS2Q9NWW9 162 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 SHPRHQ149N8 1683 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 NUP214P35658 2090 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 MTX2O75431 263 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 GLB1P16278 677 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 IAH1Q2TAA2 248 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 ZNF684Q5T5D7 378 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 IL20RBQ6UXL0 311 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 UMODL1-AS1Q8N2C9 162 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 OR52N1Q8NH53 320 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 PRRC2BQ5JSZ5 2229 aaKnown RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 ELOA3CA0A087WX78 387 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-209ENST00000437951 RFPL4AA6NLU0 287 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 RFPL4AL1F8VTS6 287 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 CTXN2P0C2S0 81 aa10.76□□□□□ -0.69
PTCH1-209ENST00000437951 LAMP1P11279 417 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms