RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 OR51J1Q9H342 316 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 PLEKHM1Q9Y4G2 1056 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 GASTP01350 101 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 NXNL2Q5VZ03 156 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 TRNP1Q6NT89 227 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 OR4F15Q8NGB8 312 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 CMSS1Q9BQ75 279 aaKnown RBP14.7□□□□□ -0.06
PTPN13-204ENST00000436978 C1orf123Q9NWV4 160 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 ATG2BQ96BY7 2078 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 LRP5LA4QPB2 252 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 TMEM221A6NGB7 291 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 C4orf47A7E2U8 309 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 SURF4O15260 269 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 CHATP28329 748 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 BCL6P41182 706 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 PFN3P60673 137 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 CLEC14AQ86T13 490 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 PCDHGA1Q9Y5H4 931 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 STRCP1A6NGW2 1772 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 WNK3Q9BYP7 1800 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 J3KTA2 159 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 PTGER4P35408 488 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 LIM2P55344 173 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 ELAVL1Q15717 326 aaKnown RBP14.7□□□□□ -0.06
PTPN13-204ENST00000436978 PRAMEF20Q5VT98 475 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 KLHDC8BQ8IXV7 354 aa14.7□□□□□ -0.06
PTPN13-204ENST00000436978 DND1Q8IYX4 353 aaKnown RBP14.7□□□□□ -0.06
PTPN13-204ENST00000436978 BIDP55957 195 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 OR2T11Q8NH01 316 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 OR14A2Q96R54 314 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 C6orf183Q5T699 404 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 GLIPR2Q9H4G4 154 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 NRIP3Q9NQ35 241 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 APOBEC1P41238 236 aaKnown RBP14.69□□□□□ -0.06
PTPN13-204ENST00000436978 MED6O75586 246 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 ALPLP05186 524 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 PTGER1P34995 402 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 F2RL1P55085 397 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 FRMPD2BQ6IN97 320 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 S100PBPQ96BU1 408 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 ASF1BQ9NVP2 202 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 CEBPZOSA8MTT3 80 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 CRHBPP24387 322 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 HTR1FP30939 366 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 HTR2BP41595 481 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 CSNK1G2P78368 415 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 CLDN24A6NM45 220 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 ZNF814B7Z6K7 855 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 OPRL1P41146 370 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 RAB4BP61018 213 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 OR13H1Q8NG92 308 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 A8MVM7 634 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 ARPC5O15511 151 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 TAPBPO15533 448 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 HLA-AP01891 365 aaKnown RBP14.69□□□□□ -0.06
PTPN13-204ENST00000436978 FBXO45P0C2W1 286 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 OR8B8Q15620 311 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 ZNF836Q6ZNA1 936 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 STK35Q8TDR2 534 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 MMP17Q9ULZ9 603 aa14.69□□□□□ -0.06
PTPN13-204ENST00000436978 RFPL3O75679 317 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 NFYAP23511 347 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 LUMP51884 338 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 PAPD4Q6PIY7 484 aaKnown RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 OR51D1Q8NGF3 324 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 CALHM2Q9HA72 323 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 LIN7BQ9HAP6 207 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 OPN1LWP04000 364 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 SRFP11831 508 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 THBS3P49746 956 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 CCL11P51671 97 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 YIF1BQ5BJH7 314 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 COMMD7Q86VX2 200 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ZFP90Q8TF47 636 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ZNF582Q96NG8 517 aaPredicted RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 TMEM59Q9BXS4 323 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 PLXNA1Q9UIW2 1896 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 LRIT2A6NDA9 550 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 TMEM240Q5SV17 173 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 DEDD2Q8WXF8 326 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 C17orf112F2Z3M2 114 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 IFNA17P01571 189 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 MSL3P1P0C860 447 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 SEC61A1P61619 476 aaKnown RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 VHLLQ6RSH7 139 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 SGK3Q96BR1 496 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 OR51E2Q9H255 320 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 TRAPPC2LQ9UL33 140 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 FAM183AA6NL82 134 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 EIF4E2O60573 245 aaKnown RBP14.68□□□□□ -0.06
PTPN13-204ENST00000436978 KLKB1P03952 638 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 SEMA3BQ13214 749 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ZNF679Q8IYX0 411 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ITFG2Q969R8 447 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 TSSK2Q96PF2 358 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 PFDN5Q99471 154 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ASIC5Q9NY37 505 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ANKRD34BA5PLL1 514 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 TNFRSF10AO00220 468 aa14.68□□□□□ -0.06
PTPN13-204ENST00000436978 ARPC1BO15143 372 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms